Gene : Solyc05g013410.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) KOG4014 - Uncharacterized conserved protein (contains TPR repeat) Description:  Sel1 domain protein repeat-containing protein (AHRD V1 *-*- A0L961_MAGSM); contains Interpro domain(s) IPR011990 Tetratricopeptide-like helical
Genomic Order:  739 Name:  ? Solyc05g013410.2
Secondary Identifier:  ? PAC:36144376
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc05g013410.2 0.5kb upstream 0.5kb upstream 4729 true SL2.50ch05: 6479760-6484488 Solanum lycopersicum
Solyc05g013410.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch05: 6479760-6480259 Solanum lycopersicum
Solyc05g013410.2 0.5kb downstream 0.5kb downstream 4729 true SL2.50ch05: 6480260-6484988 Solanum lycopersicum
Solyc05g013410.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch05: 6484489-6484988 Solanum lycopersicum
Solyc05g013410.2 1.0kb upstream 1.0kb upstream 5229 true SL2.50ch05: 6479260-6484488 Solanum lycopersicum
Solyc05g013410.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch05: 6479260-6480259 Solanum lycopersicum
Solyc05g013410.2 1.0kb downstream 1.0kb downstream 5229 true SL2.50ch05: 6480260-6485488 Solanum lycopersicum
Solyc05g013410.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch05: 6484489-6485488 Solanum lycopersicum
Solyc05g013410.2 2.0kb upstream 2.0kb upstream 6229 true SL2.50ch05: 6478260-6484488 Solanum lycopersicum
Solyc05g013410.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch05: 6478260-6480259 Solanum lycopersicum
Solyc05g013410.2 2.0kb downstream 2.0kb downstream 6229 true SL2.50ch05: 6480260-6486488 Solanum lycopersicum
Solyc05g013410.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch05: 6484489-6486488 Solanum lycopersicum
Solyc05g013410.2 5.0kb upstream 5.0kb upstream 9229 true SL2.50ch05: 6475260-6484488 Solanum lycopersicum
Solyc05g013410.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch05: 6475260-6480259 Solanum lycopersicum
Solyc05g013410.2 5.0kb downstream 5.0kb downstream 9229 true SL2.50ch05: 6480260-6489488 Solanum lycopersicum
Solyc05g013410.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch05: 6484489-6489488 Solanum lycopersicum
Solyc05g013410.2 10.0kb upstream 10.0kb upstream 14229 true SL2.50ch05: 6470260-6484488 Solanum lycopersicum
Solyc05g013410.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch05: 6470260-6480259 Solanum lycopersicum
Solyc05g013410.2 10.0kb downstream 10.0kb downstream 14229 true SL2.50ch05: 6480260-6494488 Solanum lycopersicum
Solyc05g013410.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch05: 6484489-6494488 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121478364 5263 Asterids View MSA
123747474 5271 Pentapetalae View MSA
122790025 5272 Eudicot View MSA
122044811 5273 Angiosperm View MSA
123428907 5275 Viridiplantae View MSA
121345855 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain