Gene : Solyc05g013720.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR11452:SF14 - ALPHA-GALACTOSIDASE A Description:  Alpha-galactosidase (AHRD V1 *-*- D4LCA1_9FIRM); contains Interpro domain(s) IPR013785 Aldolase-type TIM barrel
Genomic Order:  770 Name:  ? Solyc05g013720.2
Secondary Identifier:  ? PAC:36145368
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum PWY0-1301 Solanum lycopersicum pathologic  
Slycopersicum PWY-6527 Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc05g013720.2 0.5kb upstream 0.5kb upstream 6829 true SL2.50ch05: 7017520-7024348 Solanum lycopersicum
Solyc05g013720.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch05: 7023849-7024348 Solanum lycopersicum
Solyc05g013720.2 0.5kb downstream 0.5kb downstream 6829 true SL2.50ch05: 7017020-7023848 Solanum lycopersicum
Solyc05g013720.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch05: 7017020-7017519 Solanum lycopersicum
Solyc05g013720.2 1.0kb upstream 1.0kb upstream 7329 true SL2.50ch05: 7017520-7024848 Solanum lycopersicum
Solyc05g013720.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch05: 7023849-7024848 Solanum lycopersicum
Solyc05g013720.2 1.0kb downstream 1.0kb downstream 7329 true SL2.50ch05: 7016520-7023848 Solanum lycopersicum
Solyc05g013720.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch05: 7016520-7017519 Solanum lycopersicum
Solyc05g013720.2 2.0kb upstream 2.0kb upstream 8329 true SL2.50ch05: 7017520-7025848 Solanum lycopersicum
Solyc05g013720.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch05: 7023849-7025848 Solanum lycopersicum
Solyc05g013720.2 2.0kb downstream 2.0kb downstream 8329 true SL2.50ch05: 7015520-7023848 Solanum lycopersicum
Solyc05g013720.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch05: 7015520-7017519 Solanum lycopersicum
Solyc05g013720.2 5.0kb upstream 5.0kb upstream 11329 true SL2.50ch05: 7017520-7028848 Solanum lycopersicum
Solyc05g013720.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch05: 7023849-7028848 Solanum lycopersicum
Solyc05g013720.2 5.0kb downstream 5.0kb downstream 11329 true SL2.50ch05: 7012520-7023848 Solanum lycopersicum
Solyc05g013720.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch05: 7012520-7017519 Solanum lycopersicum
Solyc05g013720.2 10.0kb upstream 10.0kb upstream 16329 true SL2.50ch05: 7017520-7033848 Solanum lycopersicum
Solyc05g013720.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch05: 7023849-7033848 Solanum lycopersicum
Solyc05g013720.2 10.0kb downstream 10.0kb downstream 16329 true SL2.50ch05: 7007520-7023848 Solanum lycopersicum
Solyc05g013720.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch05: 7007520-7017519 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121475182 5263 Asterids View MSA
123740921 5271 Pentapetalae View MSA
122794912 5272 Eudicot View MSA
122043993 5273 Angiosperm View MSA
121347299 5274 Embryophyte View MSA
123428348 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain