Gene : Solyc05g025560.1 S. lycopersicum ITAG2.4
Defline:  (1 of 6) PTHR10422 - CYTOCHROME C OXIDASE SUBUNIT 1 Description:  Cytochrome c oxidase subunit 1 (AHRD V1 ***- Q70G81_SOLCO); contains Interpro domain(s) IPR000883 Cytochrome c oxidase, subunit I
Genomic Order:  1322 Name:  ? Solyc05g025560.1
Secondary Identifier:  ? PAC:36144751
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc05g025560.1 0.5kb upstream 0.5kb upstream 692 true SL2.50ch05: 33876269-33876960 Solanum lycopersicum
Solyc05g025560.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch05: 33876269-33876768 Solanum lycopersicum
Solyc05g025560.1 0.5kb downstream 0.5kb downstream 692 true SL2.50ch05: 33876769-33877460 Solanum lycopersicum
Solyc05g025560.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch05: 33876961-33877460 Solanum lycopersicum
Solyc05g025560.1 1.0kb upstream 1.0kb upstream 1192 true SL2.50ch05: 33875769-33876960 Solanum lycopersicum
Solyc05g025560.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch05: 33875769-33876768 Solanum lycopersicum
Solyc05g025560.1 1.0kb downstream 1.0kb downstream 1192 true SL2.50ch05: 33876769-33877960 Solanum lycopersicum
Solyc05g025560.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch05: 33876961-33877960 Solanum lycopersicum
Solyc05g025560.1 2.0kb upstream 2.0kb upstream 2192 true SL2.50ch05: 33874769-33876960 Solanum lycopersicum
Solyc05g025560.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch05: 33874769-33876768 Solanum lycopersicum
Solyc05g025560.1 2.0kb downstream 2.0kb downstream 2192 true SL2.50ch05: 33876769-33878960 Solanum lycopersicum
Solyc05g025560.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch05: 33876961-33878960 Solanum lycopersicum
Solyc05g025560.1 5.0kb upstream 5.0kb upstream 5192 true SL2.50ch05: 33871769-33876960 Solanum lycopersicum
Solyc05g025560.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch05: 33871769-33876768 Solanum lycopersicum
Solyc05g025560.1 5.0kb downstream 5.0kb downstream 5192 true SL2.50ch05: 33876769-33881960 Solanum lycopersicum
Solyc05g025560.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch05: 33876961-33881960 Solanum lycopersicum
Solyc05g025560.1 10.0kb upstream 10.0kb upstream 10192 true SL2.50ch05: 33866769-33876960 Solanum lycopersicum
Solyc05g025560.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch05: 33866769-33876768 Solanum lycopersicum
Solyc05g025560.1 10.0kb downstream 10.0kb downstream 10192 true SL2.50ch05: 33876769-33886960 Solanum lycopersicum
Solyc05g025560.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch05: 33876961-33886960 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121779752 5273 Angiosperm View MSA
121367555 5263 Asterids Singleton cluster - no MSA
123744092 5271 Pentapetalae View MSA
122770898 5272 Eudicot View MSA
121349184 5274 Embryophyte View MSA
123381202 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain