Gene : Solyc05g018340.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR23238 - RNA BINDING PROTEIN Description:  cDNA clone 001-201-C05 full insert sequence (AHRD V1 **-- B7EY91_ORYSJ); contains Interpro domain(s) IPR001876 Zinc finger, RanBP2-type
Genomic Order:  1116 Name:  ? Solyc05g018340.2
Secondary Identifier:  ? PAC:36146572
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc05g018340.2 0.5kb upstream 0.5kb upstream 6569 true SL2.50ch05: 20573343-20579911 Solanum lycopersicum
Solyc05g018340.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch05: 20573343-20573842 Solanum lycopersicum
Solyc05g018340.2 0.5kb downstream 0.5kb downstream 6569 true SL2.50ch05: 20573843-20580411 Solanum lycopersicum
Solyc05g018340.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch05: 20579912-20580411 Solanum lycopersicum
Solyc05g018340.2 1.0kb upstream 1.0kb upstream 7069 true SL2.50ch05: 20572843-20579911 Solanum lycopersicum
Solyc05g018340.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch05: 20572843-20573842 Solanum lycopersicum
Solyc05g018340.2 1.0kb downstream 1.0kb downstream 7069 true SL2.50ch05: 20573843-20580911 Solanum lycopersicum
Solyc05g018340.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch05: 20579912-20580911 Solanum lycopersicum
Solyc05g018340.2 2.0kb upstream 2.0kb upstream 8069 true SL2.50ch05: 20571843-20579911 Solanum lycopersicum
Solyc05g018340.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch05: 20571843-20573842 Solanum lycopersicum
Solyc05g018340.2 2.0kb downstream 2.0kb downstream 8069 true SL2.50ch05: 20573843-20581911 Solanum lycopersicum
Solyc05g018340.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch05: 20579912-20581911 Solanum lycopersicum
Solyc05g018340.2 5.0kb upstream 5.0kb upstream 11069 true SL2.50ch05: 20568843-20579911 Solanum lycopersicum
Solyc05g018340.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch05: 20568843-20573842 Solanum lycopersicum
Solyc05g018340.2 5.0kb downstream 5.0kb downstream 11069 true SL2.50ch05: 20573843-20584911 Solanum lycopersicum
Solyc05g018340.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch05: 20579912-20584911 Solanum lycopersicum
Solyc05g018340.2 10.0kb upstream 10.0kb upstream 16069 true SL2.50ch05: 20563843-20579911 Solanum lycopersicum
Solyc05g018340.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch05: 20563843-20573842 Solanum lycopersicum
Solyc05g018340.2 10.0kb downstream 10.0kb downstream 16069 true SL2.50ch05: 20573843-20589911 Solanum lycopersicum
Solyc05g018340.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch05: 20579912-20589911 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040867 5273 Angiosperm View MSA
121476005 5263 Asterids View MSA
123752597 5271 Pentapetalae View MSA
122794158 5272 Eudicot View MSA
123429142 5275 Viridiplantae View MSA
121350516 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain