Gene : Solyc05g017940.2 S. lycopersicum ITAG2.4
Defline:  (1 of 56) PF00892 - EamA-like transporter family (EamA) Description:  Integral membrane protein DUF6 containing protein expressed (AHRD V1 *-*- Q10E65_ORYSJ); contains Interpro domain(s) IPR000620 Protein of unknown function DUF6, transmembrane
Genomic Order:  1079 Name:  ? Solyc05g017940.2
Secondary Identifier:  ? PAC:36146530
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Ontology Annotation Displayer

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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc05g017940.2 0.5kb upstream 0.5kb upstream 3477 true SL2.50ch05: 19265072-19268548 Solanum lycopersicum
Solyc05g017940.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch05: 19265072-19265571 Solanum lycopersicum
Solyc05g017940.2 0.5kb downstream 0.5kb downstream 3477 true SL2.50ch05: 19265572-19269048 Solanum lycopersicum
Solyc05g017940.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch05: 19268549-19269048 Solanum lycopersicum
Solyc05g017940.2 1.0kb upstream 1.0kb upstream 3977 true SL2.50ch05: 19264572-19268548 Solanum lycopersicum
Solyc05g017940.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch05: 19264572-19265571 Solanum lycopersicum
Solyc05g017940.2 1.0kb downstream 1.0kb downstream 3977 true SL2.50ch05: 19265572-19269548 Solanum lycopersicum
Solyc05g017940.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch05: 19268549-19269548 Solanum lycopersicum
Solyc05g017940.2 2.0kb upstream 2.0kb upstream 4977 true SL2.50ch05: 19263572-19268548 Solanum lycopersicum
Solyc05g017940.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch05: 19263572-19265571 Solanum lycopersicum
Solyc05g017940.2 2.0kb downstream 2.0kb downstream 4977 true SL2.50ch05: 19265572-19270548 Solanum lycopersicum
Solyc05g017940.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch05: 19268549-19270548 Solanum lycopersicum
Solyc05g017940.2 5.0kb upstream 5.0kb upstream 7977 true SL2.50ch05: 19260572-19268548 Solanum lycopersicum
Solyc05g017940.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch05: 19260572-19265571 Solanum lycopersicum
Solyc05g017940.2 5.0kb downstream 5.0kb downstream 7977 true SL2.50ch05: 19265572-19273548 Solanum lycopersicum
Solyc05g017940.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch05: 19268549-19273548 Solanum lycopersicum
Solyc05g017940.2 10.0kb upstream 10.0kb upstream 12977 true SL2.50ch05: 19255572-19268548 Solanum lycopersicum
Solyc05g017940.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch05: 19255572-19265571 Solanum lycopersicum
Solyc05g017940.2 10.0kb downstream 10.0kb downstream 12977 true SL2.50ch05: 19265572-19278548 Solanum lycopersicum
Solyc05g017940.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch05: 19268549-19278548 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026855 5273 Angiosperm View MSA
121368036 5263 Asterids Singleton cluster - no MSA
123651356 5271 Pentapetalae Singleton cluster - no MSA
122685282 5272 Eudicot Singleton cluster - no MSA
121296612 5274 Embryophyte View MSA
123426683 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain