Gene : Solyc06g005300.2 S. lycopersicum ITAG2.4
Defline:  (1 of 2) PTHR33431:SF2 - GB Description:  UPA23 (AHRD V1 ***- C8YZB5_CAPAN); contains Interpro domain(s) IPR012862 Protein of unknown function DUF1635
Genomic Order:  31 Name:  ? Solyc06g005300.2
Secondary Identifier:  ? PAC:36130484
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc06g005300.2 0.5kb upstream 0.5kb upstream 2332 true SL2.50ch06: 307747-310078 Solanum lycopersicum
Solyc06g005300.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch06: 309579-310078 Solanum lycopersicum
Solyc06g005300.2 0.5kb downstream 0.5kb downstream 2332 true SL2.50ch06: 307247-309578 Solanum lycopersicum
Solyc06g005300.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch06: 307247-307746 Solanum lycopersicum
Solyc06g005300.2 1.0kb upstream 1.0kb upstream 2832 true SL2.50ch06: 307747-310578 Solanum lycopersicum
Solyc06g005300.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch06: 309579-310578 Solanum lycopersicum
Solyc06g005300.2 1.0kb downstream 1.0kb downstream 2832 true SL2.50ch06: 306747-309578 Solanum lycopersicum
Solyc06g005300.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch06: 306747-307746 Solanum lycopersicum
Solyc06g005300.2 2.0kb upstream 2.0kb upstream 3832 true SL2.50ch06: 307747-311578 Solanum lycopersicum
Solyc06g005300.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch06: 309579-311578 Solanum lycopersicum
Solyc06g005300.2 2.0kb downstream 2.0kb downstream 3832 true SL2.50ch06: 305747-309578 Solanum lycopersicum
Solyc06g005300.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch06: 305747-307746 Solanum lycopersicum
Solyc06g005300.2 5.0kb upstream 5.0kb upstream 6832 true SL2.50ch06: 307747-314578 Solanum lycopersicum
Solyc06g005300.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch06: 309579-314578 Solanum lycopersicum
Solyc06g005300.2 5.0kb downstream 5.0kb downstream 6832 true SL2.50ch06: 302747-309578 Solanum lycopersicum
Solyc06g005300.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch06: 302747-307746 Solanum lycopersicum
Solyc06g005300.2 10.0kb upstream 10.0kb upstream 11832 true SL2.50ch06: 307747-319578 Solanum lycopersicum
Solyc06g005300.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch06: 309579-319578 Solanum lycopersicum
Solyc06g005300.2 10.0kb downstream 10.0kb downstream 11832 true SL2.50ch06: 297747-309578 Solanum lycopersicum
Solyc06g005300.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch06: 297747-307746 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121479085 5263 Asterids View MSA
123750742 5271 Pentapetalae View MSA
122794296 5272 Eudicot View MSA
122048451 5273 Angiosperm View MSA
121310976 5274 Embryophyte View MSA
123348340 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain