Gene : Solyc06g008860.2 S. lycopersicum ITAG2.4
Defline:  (1 of 2) K11095 - U1 small nuclear ribonucleoprotein C (SNRPC) Description:  U1 small nuclear ribonucleoprotein C protein (AHRD V1 *-*- C1MKH9_MICPS); contains Interpro domain(s) IPR000690 Zinc finger, C2H2-type matrin
Genomic Order:  287 Name:  ? Solyc06g008860.2
Secondary Identifier:  ? PAC:36128476
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc06g008860.2 0.5kb upstream 0.5kb upstream 5379 true SL2.50ch06: 2801290-2806668 Solanum lycopersicum
Solyc06g008860.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch06: 2806169-2806668 Solanum lycopersicum
Solyc06g008860.2 0.5kb downstream 0.5kb downstream 5379 true SL2.50ch06: 2800790-2806168 Solanum lycopersicum
Solyc06g008860.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch06: 2800790-2801289 Solanum lycopersicum
Solyc06g008860.2 1.0kb upstream 1.0kb upstream 5879 true SL2.50ch06: 2801290-2807168 Solanum lycopersicum
Solyc06g008860.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch06: 2806169-2807168 Solanum lycopersicum
Solyc06g008860.2 1.0kb downstream 1.0kb downstream 5879 true SL2.50ch06: 2800290-2806168 Solanum lycopersicum
Solyc06g008860.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch06: 2800290-2801289 Solanum lycopersicum
Solyc06g008860.2 2.0kb upstream 2.0kb upstream 6879 true SL2.50ch06: 2801290-2808168 Solanum lycopersicum
Solyc06g008860.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch06: 2806169-2808168 Solanum lycopersicum
Solyc06g008860.2 2.0kb downstream 2.0kb downstream 6879 true SL2.50ch06: 2799290-2806168 Solanum lycopersicum
Solyc06g008860.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch06: 2799290-2801289 Solanum lycopersicum
Solyc06g008860.2 5.0kb upstream 5.0kb upstream 9879 true SL2.50ch06: 2801290-2811168 Solanum lycopersicum
Solyc06g008860.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch06: 2806169-2811168 Solanum lycopersicum
Solyc06g008860.2 5.0kb downstream 5.0kb downstream 9879 true SL2.50ch06: 2796290-2806168 Solanum lycopersicum
Solyc06g008860.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch06: 2796290-2801289 Solanum lycopersicum
Solyc06g008860.2 10.0kb upstream 10.0kb upstream 14879 true SL2.50ch06: 2801290-2816168 Solanum lycopersicum
Solyc06g008860.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch06: 2806169-2816168 Solanum lycopersicum
Solyc06g008860.2 10.0kb downstream 10.0kb downstream 14879 true SL2.50ch06: 2791290-2806168 Solanum lycopersicum
Solyc06g008860.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch06: 2791290-2801289 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121475743 5263 Asterids View MSA
123747272 5271 Pentapetalae View MSA
122794808 5272 Eudicot View MSA
122048788 5273 Angiosperm View MSA
121348287 5274 Embryophyte View MSA
123425878 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain