Gene : Solyc06g008970.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) K10844 - DNA excision repair protein ERCC-2 (ERCC2, XPD) Description:  ATP-dependent DNA helicase Ta0057 (AHRD V1 **** XPD_THEAC); contains Interpro domain(s) IPR001945 Xeroderma pigmentosum group D protein
Genomic Order:  298 Name:  ? Solyc06g008970.2
Secondary Identifier:  ? PAC:36128631
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc06g008970.2 0.5kb upstream 0.5kb upstream 9006 true SL2.50ch06: 2910891-2919896 Solanum lycopersicum
Solyc06g008970.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch06: 2919397-2919896 Solanum lycopersicum
Solyc06g008970.2 0.5kb downstream 0.5kb downstream 9006 true SL2.50ch06: 2910391-2919396 Solanum lycopersicum
Solyc06g008970.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch06: 2910391-2910890 Solanum lycopersicum
Solyc06g008970.2 1.0kb upstream 1.0kb upstream 9506 true SL2.50ch06: 2910891-2920396 Solanum lycopersicum
Solyc06g008970.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch06: 2919397-2920396 Solanum lycopersicum
Solyc06g008970.2 1.0kb downstream 1.0kb downstream 9506 true SL2.50ch06: 2909891-2919396 Solanum lycopersicum
Solyc06g008970.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch06: 2909891-2910890 Solanum lycopersicum
Solyc06g008970.2 2.0kb upstream 2.0kb upstream 10506 true SL2.50ch06: 2910891-2921396 Solanum lycopersicum
Solyc06g008970.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch06: 2919397-2921396 Solanum lycopersicum
Solyc06g008970.2 2.0kb downstream 2.0kb downstream 10506 true SL2.50ch06: 2908891-2919396 Solanum lycopersicum
Solyc06g008970.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch06: 2908891-2910890 Solanum lycopersicum
Solyc06g008970.2 5.0kb upstream 5.0kb upstream 13506 true SL2.50ch06: 2910891-2924396 Solanum lycopersicum
Solyc06g008970.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch06: 2919397-2924396 Solanum lycopersicum
Solyc06g008970.2 5.0kb downstream 5.0kb downstream 13506 true SL2.50ch06: 2905891-2919396 Solanum lycopersicum
Solyc06g008970.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch06: 2905891-2910890 Solanum lycopersicum
Solyc06g008970.2 10.0kb upstream 10.0kb upstream 18506 true SL2.50ch06: 2910891-2929396 Solanum lycopersicum
Solyc06g008970.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch06: 2919397-2929396 Solanum lycopersicum
Solyc06g008970.2 10.0kb downstream 10.0kb downstream 18506 true SL2.50ch06: 2900891-2919396 Solanum lycopersicum
Solyc06g008970.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch06: 2900891-2910890 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121476118 5263 Asterids View MSA
123737964 5271 Pentapetalae View MSA
122790118 5272 Eudicot View MSA
122046497 5273 Angiosperm View MSA
121344254 5274 Embryophyte View MSA
123426727 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain