Gene : Solyc06g009010.1 S. lycopersicum ITAG2.4
Defline:  (1 of 3) PTHR11064:SF42 - NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-5 Description:  Nuclear transcription factor Y subunit B-3 (AHRD V1 *-** B6SUG8_MAIZE); contains Interpro domain(s) IPR003957 Transcription factor, CBFA/NFYB, DNA topoisomerase
Genomic Order:  302 Name:  ? Solyc06g009010.1
Secondary Identifier:  ? PAC:36129140
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc06g009010.1 0.5kb upstream 0.5kb upstream 1037 true SL2.50ch06: 2953980-2955016 Solanum lycopersicum
Solyc06g009010.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch06: 2954517-2955016 Solanum lycopersicum
Solyc06g009010.1 0.5kb downstream 0.5kb downstream 1037 true SL2.50ch06: 2953480-2954516 Solanum lycopersicum
Solyc06g009010.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch06: 2953480-2953979 Solanum lycopersicum
Solyc06g009010.1 1.0kb upstream 1.0kb upstream 1537 true SL2.50ch06: 2953980-2955516 Solanum lycopersicum
Solyc06g009010.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch06: 2954517-2955516 Solanum lycopersicum
Solyc06g009010.1 1.0kb downstream 1.0kb downstream 1537 true SL2.50ch06: 2952980-2954516 Solanum lycopersicum
Solyc06g009010.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch06: 2952980-2953979 Solanum lycopersicum
Solyc06g009010.1 2.0kb upstream 2.0kb upstream 2537 true SL2.50ch06: 2953980-2956516 Solanum lycopersicum
Solyc06g009010.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch06: 2954517-2956516 Solanum lycopersicum
Solyc06g009010.1 2.0kb downstream 2.0kb downstream 2537 true SL2.50ch06: 2951980-2954516 Solanum lycopersicum
Solyc06g009010.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch06: 2951980-2953979 Solanum lycopersicum
Solyc06g009010.1 5.0kb upstream 5.0kb upstream 5537 true SL2.50ch06: 2953980-2959516 Solanum lycopersicum
Solyc06g009010.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch06: 2954517-2959516 Solanum lycopersicum
Solyc06g009010.1 5.0kb downstream 5.0kb downstream 5537 true SL2.50ch06: 2948980-2954516 Solanum lycopersicum
Solyc06g009010.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch06: 2948980-2953979 Solanum lycopersicum
Solyc06g009010.1 10.0kb upstream 10.0kb upstream 10537 true SL2.50ch06: 2953980-2964516 Solanum lycopersicum
Solyc06g009010.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch06: 2954517-2964516 Solanum lycopersicum
Solyc06g009010.1 10.0kb downstream 10.0kb downstream 10537 true SL2.50ch06: 2943980-2954516 Solanum lycopersicum
Solyc06g009010.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch06: 2943980-2953979 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041139 5273 Angiosperm View MSA
121478195 5263 Asterids View MSA
123747842 5271 Pentapetalae View MSA
122796503 5272 Eudicot View MSA
123429094 5275 Viridiplantae View MSA
121350139 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain