Gene : Solyc06g008620.1 S. lycopersicum ITAG2.4
Defline:  (1 of 2) PF07676 - WD40-like Beta Propeller Repeat (PD40) Description:  Protein tolB (AHRD V1 *-*- D3SF14_THISK); contains Interpro domain(s) IPR011042 Six-bladed beta-propeller, TolB-like
Genomic Order:  263 Name:  ? Solyc06g008620.1
Secondary Identifier:  ? PAC:36128582
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc06g008620.1 0.5kb upstream 0.5kb upstream 2483 true SL2.50ch06: 2517512-2519994 Solanum lycopersicum
Solyc06g008620.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch06: 2519495-2519994 Solanum lycopersicum
Solyc06g008620.1 0.5kb downstream 0.5kb downstream 2483 true SL2.50ch06: 2517012-2519494 Solanum lycopersicum
Solyc06g008620.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch06: 2517012-2517511 Solanum lycopersicum
Solyc06g008620.1 1.0kb upstream 1.0kb upstream 2983 true SL2.50ch06: 2517512-2520494 Solanum lycopersicum
Solyc06g008620.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch06: 2519495-2520494 Solanum lycopersicum
Solyc06g008620.1 1.0kb downstream 1.0kb downstream 2983 true SL2.50ch06: 2516512-2519494 Solanum lycopersicum
Solyc06g008620.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch06: 2516512-2517511 Solanum lycopersicum
Solyc06g008620.1 2.0kb upstream 2.0kb upstream 3983 true SL2.50ch06: 2517512-2521494 Solanum lycopersicum
Solyc06g008620.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch06: 2519495-2521494 Solanum lycopersicum
Solyc06g008620.1 2.0kb downstream 2.0kb downstream 3983 true SL2.50ch06: 2515512-2519494 Solanum lycopersicum
Solyc06g008620.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch06: 2515512-2517511 Solanum lycopersicum
Solyc06g008620.1 5.0kb upstream 5.0kb upstream 6983 true SL2.50ch06: 2517512-2524494 Solanum lycopersicum
Solyc06g008620.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch06: 2519495-2524494 Solanum lycopersicum
Solyc06g008620.1 5.0kb downstream 5.0kb downstream 6983 true SL2.50ch06: 2512512-2519494 Solanum lycopersicum
Solyc06g008620.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch06: 2512512-2517511 Solanum lycopersicum
Solyc06g008620.1 10.0kb upstream 10.0kb upstream 11983 true SL2.50ch06: 2517512-2529494 Solanum lycopersicum
Solyc06g008620.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch06: 2519495-2529494 Solanum lycopersicum
Solyc06g008620.1 10.0kb downstream 10.0kb downstream 11983 true SL2.50ch06: 2507512-2519494 Solanum lycopersicum
Solyc06g008620.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch06: 2507512-2517511 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121481356 5263 Asterids View MSA
123740244 5271 Pentapetalae View MSA
122792271 5272 Eudicot View MSA
122050472 5273 Angiosperm View MSA
121347738 5274 Embryophyte View MSA
123424154 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain