Gene : Solyc06g009990.1 S. lycopersicum ITAG2.4
Description:  Unknown Protein (AHRD V1); contains Interpro domain(s) IPR000366 Fungal pheromone mating factor STE2 GPCR Genomic Order:  399
Name:  ? Solyc06g009990.1 Secondary Identifier:  ? PAC:36129592
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc06g009990.1 0.5kb upstream 0.5kb upstream 1754 true SL2.50ch06: 4580849-4582602 Solanum lycopersicum
Solyc06g009990.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch06: 4580849-4581348 Solanum lycopersicum
Solyc06g009990.1 0.5kb downstream 0.5kb downstream 1754 true SL2.50ch06: 4581349-4583102 Solanum lycopersicum
Solyc06g009990.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch06: 4582603-4583102 Solanum lycopersicum
Solyc06g009990.1 1.0kb upstream 1.0kb upstream 2254 true SL2.50ch06: 4580349-4582602 Solanum lycopersicum
Solyc06g009990.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch06: 4580349-4581348 Solanum lycopersicum
Solyc06g009990.1 1.0kb downstream 1.0kb downstream 2254 true SL2.50ch06: 4581349-4583602 Solanum lycopersicum
Solyc06g009990.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch06: 4582603-4583602 Solanum lycopersicum
Solyc06g009990.1 2.0kb upstream 2.0kb upstream 3254 true SL2.50ch06: 4579349-4582602 Solanum lycopersicum
Solyc06g009990.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch06: 4579349-4581348 Solanum lycopersicum
Solyc06g009990.1 2.0kb downstream 2.0kb downstream 3254 true SL2.50ch06: 4581349-4584602 Solanum lycopersicum
Solyc06g009990.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch06: 4582603-4584602 Solanum lycopersicum
Solyc06g009990.1 5.0kb upstream 5.0kb upstream 6254 true SL2.50ch06: 4576349-4582602 Solanum lycopersicum
Solyc06g009990.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch06: 4576349-4581348 Solanum lycopersicum
Solyc06g009990.1 5.0kb downstream 5.0kb downstream 6254 true SL2.50ch06: 4581349-4587602 Solanum lycopersicum
Solyc06g009990.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch06: 4582603-4587602 Solanum lycopersicum
Solyc06g009990.1 10.0kb upstream 10.0kb upstream 11254 true SL2.50ch06: 4571349-4582602 Solanum lycopersicum
Solyc06g009990.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch06: 4571349-4581348 Solanum lycopersicum
Solyc06g009990.1 10.0kb downstream 10.0kb downstream 11254 true SL2.50ch06: 4581349-4592602 Solanum lycopersicum
Solyc06g009990.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch06: 4582603-4592602 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121695355 5273 Angiosperm Singleton cluster - no MSA
121368284 5263 Asterids Singleton cluster - no MSA
123651554 5271 Pentapetalae Singleton cluster - no MSA
122685479 5272 Eudicot Singleton cluster - no MSA
120967166 5274 Embryophyte Singleton cluster - no MSA
123007458 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain