Gene : Solyc06g050870.2 S. lycopersicum ITAG2.4
Defline:  (1 of 3) PF04588 - Hypoxia induced protein conserved region (HIG_1_N) Description:  Hypoxia induced protein conserved region containing protein expressed (AHRD V1 ***- Q2QYP0_ORYSJ)
Genomic Order:  954 Name:  ? Solyc06g050870.2
Secondary Identifier:  ? PAC:36130089
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc06g050870.2 0.5kb upstream 0.5kb upstream 1029 true SL2.50ch06: 33717638-33718666 Solanum lycopersicum
Solyc06g050870.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch06: 33718167-33718666 Solanum lycopersicum
Solyc06g050870.2 0.5kb downstream 0.5kb downstream 1029 true SL2.50ch06: 33717138-33718166 Solanum lycopersicum
Solyc06g050870.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch06: 33717138-33717637 Solanum lycopersicum
Solyc06g050870.2 1.0kb upstream 1.0kb upstream 1529 true SL2.50ch06: 33717638-33719166 Solanum lycopersicum
Solyc06g050870.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch06: 33718167-33719166 Solanum lycopersicum
Solyc06g050870.2 1.0kb downstream 1.0kb downstream 1529 true SL2.50ch06: 33716638-33718166 Solanum lycopersicum
Solyc06g050870.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch06: 33716638-33717637 Solanum lycopersicum
Solyc06g050870.2 2.0kb upstream 2.0kb upstream 2529 true SL2.50ch06: 33717638-33720166 Solanum lycopersicum
Solyc06g050870.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch06: 33718167-33720166 Solanum lycopersicum
Solyc06g050870.2 2.0kb downstream 2.0kb downstream 2529 true SL2.50ch06: 33715638-33718166 Solanum lycopersicum
Solyc06g050870.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch06: 33715638-33717637 Solanum lycopersicum
Solyc06g050870.2 5.0kb upstream 5.0kb upstream 5529 true SL2.50ch06: 33717638-33723166 Solanum lycopersicum
Solyc06g050870.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch06: 33718167-33723166 Solanum lycopersicum
Solyc06g050870.2 5.0kb downstream 5.0kb downstream 5529 true SL2.50ch06: 33712638-33718166 Solanum lycopersicum
Solyc06g050870.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch06: 33712638-33717637 Solanum lycopersicum
Solyc06g050870.2 10.0kb upstream 10.0kb upstream 10529 true SL2.50ch06: 33717638-33728166 Solanum lycopersicum
Solyc06g050870.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch06: 33718167-33728166 Solanum lycopersicum
Solyc06g050870.2 10.0kb downstream 10.0kb downstream 10529 true SL2.50ch06: 33707638-33718166 Solanum lycopersicum
Solyc06g050870.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch06: 33707638-33717637 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121468790 5263 Asterids View MSA
123747156 5271 Pentapetalae View MSA
122795420 5272 Eudicot View MSA
122049658 5273 Angiosperm View MSA
123428942 5275 Viridiplantae View MSA
121349742 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain