Gene : Solyc06g050550.2 S. lycopersicum ITAG2.4
Defline:  (1 of 2) PTHR10555//PTHR10555:SF155 - SORTING NEXIN // SUBFAMILY NOT NAMED Description:  Sorting nexin 1 (AHRD V1 ***- Q70YZ8_BRAOL); contains Interpro domain(s) IPR001683 Phox-like
Genomic Order:  922 Name:  ? Solyc06g050550.2
Secondary Identifier:  ? PAC:36129354
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc06g050550.2 0.5kb upstream 0.5kb upstream 7933 true SL2.50ch06: 33252130-33260062 Solanum lycopersicum
Solyc06g050550.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch06: 33252130-33252629 Solanum lycopersicum
Solyc06g050550.2 0.5kb downstream 0.5kb downstream 7933 true SL2.50ch06: 33252630-33260562 Solanum lycopersicum
Solyc06g050550.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch06: 33260063-33260562 Solanum lycopersicum
Solyc06g050550.2 1.0kb upstream 1.0kb upstream 8433 true SL2.50ch06: 33251630-33260062 Solanum lycopersicum
Solyc06g050550.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch06: 33251630-33252629 Solanum lycopersicum
Solyc06g050550.2 1.0kb downstream 1.0kb downstream 8433 true SL2.50ch06: 33252630-33261062 Solanum lycopersicum
Solyc06g050550.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch06: 33260063-33261062 Solanum lycopersicum
Solyc06g050550.2 2.0kb upstream 2.0kb upstream 9433 true SL2.50ch06: 33250630-33260062 Solanum lycopersicum
Solyc06g050550.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch06: 33250630-33252629 Solanum lycopersicum
Solyc06g050550.2 2.0kb downstream 2.0kb downstream 9433 true SL2.50ch06: 33252630-33262062 Solanum lycopersicum
Solyc06g050550.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch06: 33260063-33262062 Solanum lycopersicum
Solyc06g050550.2 5.0kb upstream 5.0kb upstream 12433 true SL2.50ch06: 33247630-33260062 Solanum lycopersicum
Solyc06g050550.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch06: 33247630-33252629 Solanum lycopersicum
Solyc06g050550.2 5.0kb downstream 5.0kb downstream 12433 true SL2.50ch06: 33252630-33265062 Solanum lycopersicum
Solyc06g050550.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch06: 33260063-33265062 Solanum lycopersicum
Solyc06g050550.2 10.0kb upstream 10.0kb upstream 17433 true SL2.50ch06: 33242630-33260062 Solanum lycopersicum
Solyc06g050550.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch06: 33242630-33252629 Solanum lycopersicum
Solyc06g050550.2 10.0kb downstream 10.0kb downstream 17433 true SL2.50ch06: 33252630-33270062 Solanum lycopersicum
Solyc06g050550.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch06: 33260063-33270062 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041026 5273 Angiosperm View MSA
121470239 5263 Asterids View MSA
123749355 5271 Pentapetalae View MSA
122789384 5272 Eudicot View MSA
121345182 5274 Embryophyte View MSA
123428162 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain