Gene : Solyc06g048790.1 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PF04749//PF11204 - PLAC8 family (PLAC8) // Protein of unknown function (DUF2985) (DUF2985) Description:  Os12g0109700 protein (Fragment) (AHRD V1 *-*- C7JA22_ORYSJ); contains Interpro domain(s) IPR006461 Protein of unknown function Cys-rich
Genomic Order:  848 Name:  ? Solyc06g048790.1
Secondary Identifier:  ? PAC:36129444
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc06g048790.1 0.5kb upstream 0.5kb upstream 2018 true SL2.50ch06: 31722718-31724735 Solanum lycopersicum
Solyc06g048790.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch06: 31722718-31723217 Solanum lycopersicum
Solyc06g048790.1 0.5kb downstream 0.5kb downstream 2018 true SL2.50ch06: 31723218-31725235 Solanum lycopersicum
Solyc06g048790.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch06: 31724736-31725235 Solanum lycopersicum
Solyc06g048790.1 1.0kb upstream 1.0kb upstream 2518 true SL2.50ch06: 31722218-31724735 Solanum lycopersicum
Solyc06g048790.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch06: 31722218-31723217 Solanum lycopersicum
Solyc06g048790.1 1.0kb downstream 1.0kb downstream 2518 true SL2.50ch06: 31723218-31725735 Solanum lycopersicum
Solyc06g048790.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch06: 31724736-31725735 Solanum lycopersicum
Solyc06g048790.1 2.0kb upstream 2.0kb upstream 3518 true SL2.50ch06: 31721218-31724735 Solanum lycopersicum
Solyc06g048790.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch06: 31721218-31723217 Solanum lycopersicum
Solyc06g048790.1 2.0kb downstream 2.0kb downstream 3518 true SL2.50ch06: 31723218-31726735 Solanum lycopersicum
Solyc06g048790.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch06: 31724736-31726735 Solanum lycopersicum
Solyc06g048790.1 5.0kb upstream 5.0kb upstream 6518 true SL2.50ch06: 31718218-31724735 Solanum lycopersicum
Solyc06g048790.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch06: 31718218-31723217 Solanum lycopersicum
Solyc06g048790.1 5.0kb downstream 5.0kb downstream 6518 true SL2.50ch06: 31723218-31729735 Solanum lycopersicum
Solyc06g048790.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch06: 31724736-31729735 Solanum lycopersicum
Solyc06g048790.1 10.0kb upstream 10.0kb upstream 11518 true SL2.50ch06: 31713218-31724735 Solanum lycopersicum
Solyc06g048790.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch06: 31713218-31723217 Solanum lycopersicum
Solyc06g048790.1 10.0kb downstream 10.0kb downstream 11518 true SL2.50ch06: 31723218-31734735 Solanum lycopersicum
Solyc06g048790.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch06: 31724736-31734735 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121477231 5263 Asterids View MSA
123744852 5271 Pentapetalae View MSA
122790012 5272 Eudicot View MSA
122046321 5273 Angiosperm View MSA
121349634 5274 Embryophyte View MSA
123381382 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain