Gene : Solyc06g048710.1 S. lycopersicum ITAG2.4
Defline:  (1 of 31) PF03321 - GH3 auxin-responsive promoter (GH3) Description:  Auxin-responsive GH3-like (AHRD V1 ***- Q0GUM1_ARATH); contains Interpro domain(s) IPR004993 GH3 auxin-responsive promoter
Genomic Order:  840 Name:  ? Solyc06g048710.1
Secondary Identifier:  ? PAC:36130015
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc06g048710.1 0.5kb upstream 0.5kb upstream 3387 true SL2.50ch06: 31530238-31533624 Solanum lycopersicum
Solyc06g048710.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch06: 31533125-31533624 Solanum lycopersicum
Solyc06g048710.1 0.5kb downstream 0.5kb downstream 3387 true SL2.50ch06: 31529738-31533124 Solanum lycopersicum
Solyc06g048710.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch06: 31529738-31530237 Solanum lycopersicum
Solyc06g048710.1 1.0kb upstream 1.0kb upstream 3887 true SL2.50ch06: 31530238-31534124 Solanum lycopersicum
Solyc06g048710.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch06: 31533125-31534124 Solanum lycopersicum
Solyc06g048710.1 1.0kb downstream 1.0kb downstream 3887 true SL2.50ch06: 31529238-31533124 Solanum lycopersicum
Solyc06g048710.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch06: 31529238-31530237 Solanum lycopersicum
Solyc06g048710.1 2.0kb upstream 2.0kb upstream 4887 true SL2.50ch06: 31530238-31535124 Solanum lycopersicum
Solyc06g048710.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch06: 31533125-31535124 Solanum lycopersicum
Solyc06g048710.1 2.0kb downstream 2.0kb downstream 4887 true SL2.50ch06: 31528238-31533124 Solanum lycopersicum
Solyc06g048710.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch06: 31528238-31530237 Solanum lycopersicum
Solyc06g048710.1 5.0kb upstream 5.0kb upstream 7887 true SL2.50ch06: 31530238-31538124 Solanum lycopersicum
Solyc06g048710.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch06: 31533125-31538124 Solanum lycopersicum
Solyc06g048710.1 5.0kb downstream 5.0kb downstream 7887 true SL2.50ch06: 31525238-31533124 Solanum lycopersicum
Solyc06g048710.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch06: 31525238-31530237 Solanum lycopersicum
Solyc06g048710.1 10.0kb upstream 10.0kb upstream 12887 true SL2.50ch06: 31530238-31543124 Solanum lycopersicum
Solyc06g048710.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch06: 31533125-31543124 Solanum lycopersicum
Solyc06g048710.1 10.0kb downstream 10.0kb downstream 12887 true SL2.50ch06: 31520238-31533124 Solanum lycopersicum
Solyc06g048710.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch06: 31520238-31530237 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121478029 5263 Asterids View MSA
123741688 5271 Pentapetalae View MSA
122793518 5272 Eudicot View MSA
122043357 5273 Angiosperm View MSA
121349637 5274 Embryophyte View MSA
123381383 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain