Gene : Solyc06g048920.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR11728:SF13 - GLYCEROL-3-PHOSPHATE DEHYDROGENASE [NAD(+)] 2, CHLOROPLASTIC Description:  Glycerol-3-phosphate dehydrogenase (AHRD V1 **** A8IKS4_CHLRE); contains Interpro domain(s) IPR006168 NAD-dependent glycerol-3-phosphate dehydrogenase
Genomic Order:  861 Name:  ? Solyc06g048920.2
Secondary Identifier:  ? PAC:36130054
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum PWY-6118 Solanum lycopersicum pathologic  
Slycopersicum PWY-7411 Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc06g048920.2 0.5kb upstream 0.5kb upstream 4012 true SL2.50ch06: 31948591-31952602 Solanum lycopersicum
Solyc06g048920.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch06: 31952103-31952602 Solanum lycopersicum
Solyc06g048920.2 0.5kb downstream 0.5kb downstream 4012 true SL2.50ch06: 31948091-31952102 Solanum lycopersicum
Solyc06g048920.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch06: 31948091-31948590 Solanum lycopersicum
Solyc06g048920.2 1.0kb upstream 1.0kb upstream 4512 true SL2.50ch06: 31948591-31953102 Solanum lycopersicum
Solyc06g048920.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch06: 31952103-31953102 Solanum lycopersicum
Solyc06g048920.2 1.0kb downstream 1.0kb downstream 4512 true SL2.50ch06: 31947591-31952102 Solanum lycopersicum
Solyc06g048920.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch06: 31947591-31948590 Solanum lycopersicum
Solyc06g048920.2 2.0kb upstream 2.0kb upstream 5512 true SL2.50ch06: 31948591-31954102 Solanum lycopersicum
Solyc06g048920.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch06: 31952103-31954102 Solanum lycopersicum
Solyc06g048920.2 2.0kb downstream 2.0kb downstream 5512 true SL2.50ch06: 31946591-31952102 Solanum lycopersicum
Solyc06g048920.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch06: 31946591-31948590 Solanum lycopersicum
Solyc06g048920.2 5.0kb upstream 5.0kb upstream 8512 true SL2.50ch06: 31948591-31957102 Solanum lycopersicum
Solyc06g048920.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch06: 31952103-31957102 Solanum lycopersicum
Solyc06g048920.2 5.0kb downstream 5.0kb downstream 8512 true SL2.50ch06: 31943591-31952102 Solanum lycopersicum
Solyc06g048920.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch06: 31943591-31948590 Solanum lycopersicum
Solyc06g048920.2 10.0kb upstream 10.0kb upstream 13512 true SL2.50ch06: 31948591-31962102 Solanum lycopersicum
Solyc06g048920.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch06: 31952103-31962102 Solanum lycopersicum
Solyc06g048920.2 10.0kb downstream 10.0kb downstream 13512 true SL2.50ch06: 31938591-31952102 Solanum lycopersicum
Solyc06g048920.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch06: 31938591-31948590 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121473113 5263 Asterids View MSA
123739883 5271 Pentapetalae View MSA
122793723 5272 Eudicot View MSA
122048104 5273 Angiosperm View MSA
121348116 5274 Embryophyte View MSA
123428470 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain