Gene : Solyc06g043140.2 S. lycopersicum ITAG2.4
Defline:  (1 of 2) PTHR13040 - AUTOPHAGY PROTEIN 5 Description:  Autophagy protein 5 (AHRD V1 ***- Q3MQ01_MAIZE); contains Interpro domain(s) IPR007239 Autophagy-related protein 5
Genomic Order:  786 Name:  ? Solyc06g043140.2
Secondary Identifier:  ? PAC:36130697
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc06g043140.2 0.5kb upstream 0.5kb upstream 1594 true SL2.50ch06: 29721918-29723511 Solanum lycopersicum
Solyc06g043140.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch06: 29723012-29723511 Solanum lycopersicum
Solyc06g043140.2 0.5kb downstream 0.5kb downstream 1594 true SL2.50ch06: 29721418-29723011 Solanum lycopersicum
Solyc06g043140.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch06: 29721418-29721917 Solanum lycopersicum
Solyc06g043140.2 1.0kb upstream 1.0kb upstream 2094 true SL2.50ch06: 29721918-29724011 Solanum lycopersicum
Solyc06g043140.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch06: 29723012-29724011 Solanum lycopersicum
Solyc06g043140.2 1.0kb downstream 1.0kb downstream 2094 true SL2.50ch06: 29720918-29723011 Solanum lycopersicum
Solyc06g043140.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch06: 29720918-29721917 Solanum lycopersicum
Solyc06g043140.2 2.0kb upstream 2.0kb upstream 3094 true SL2.50ch06: 29721918-29725011 Solanum lycopersicum
Solyc06g043140.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch06: 29723012-29725011 Solanum lycopersicum
Solyc06g043140.2 2.0kb downstream 2.0kb downstream 3094 true SL2.50ch06: 29719918-29723011 Solanum lycopersicum
Solyc06g043140.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch06: 29719918-29721917 Solanum lycopersicum
Solyc06g043140.2 5.0kb upstream 5.0kb upstream 6094 true SL2.50ch06: 29721918-29728011 Solanum lycopersicum
Solyc06g043140.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch06: 29723012-29728011 Solanum lycopersicum
Solyc06g043140.2 5.0kb downstream 5.0kb downstream 6094 true SL2.50ch06: 29716918-29723011 Solanum lycopersicum
Solyc06g043140.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch06: 29716918-29721917 Solanum lycopersicum
Solyc06g043140.2 10.0kb upstream 10.0kb upstream 11094 true SL2.50ch06: 29721918-29733011 Solanum lycopersicum
Solyc06g043140.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch06: 29723012-29733011 Solanum lycopersicum
Solyc06g043140.2 10.0kb downstream 10.0kb downstream 11094 true SL2.50ch06: 29711918-29723011 Solanum lycopersicum
Solyc06g043140.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch06: 29711918-29721917 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121477739 5263 Asterids View MSA
123746319 5271 Pentapetalae View MSA
122787337 5272 Eudicot View MSA
122043492 5273 Angiosperm View MSA
121349357 5274 Embryophyte View MSA
123424338 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain