Gene : Solyc06g053480.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR31155:SF9 - ACYL-[ACYL-CARRIER-PROTEIN] DESATURASE 7, CHLOROPLASTIC Description:  Stearoyl-acyl carrier protein desaturase (AHRD V1 **** B7TZ44_SPIOL); contains Interpro domain(s) IPR005067 Fatty acid desaturase, type 2
Genomic Order:  1110 Name:  ? Solyc06g053480.2
Secondary Identifier:  ? PAC:36128557
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum PWY-5147 Solanum lycopersicum pathologic  
Slycopersicum PWY-5156 Solanum lycopersicum pathologic  
Slycopersicum PWY-5366 Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc06g053480.2 0.5kb upstream 0.5kb upstream 4831 true SL2.50ch06: 36280033-36284863 Solanum lycopersicum
Solyc06g053480.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch06: 36280033-36280532 Solanum lycopersicum
Solyc06g053480.2 0.5kb downstream 0.5kb downstream 4831 true SL2.50ch06: 36280533-36285363 Solanum lycopersicum
Solyc06g053480.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch06: 36284864-36285363 Solanum lycopersicum
Solyc06g053480.2 1.0kb upstream 1.0kb upstream 5331 true SL2.50ch06: 36279533-36284863 Solanum lycopersicum
Solyc06g053480.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch06: 36279533-36280532 Solanum lycopersicum
Solyc06g053480.2 1.0kb downstream 1.0kb downstream 5331 true SL2.50ch06: 36280533-36285863 Solanum lycopersicum
Solyc06g053480.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch06: 36284864-36285863 Solanum lycopersicum
Solyc06g053480.2 2.0kb upstream 2.0kb upstream 6331 true SL2.50ch06: 36278533-36284863 Solanum lycopersicum
Solyc06g053480.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch06: 36278533-36280532 Solanum lycopersicum
Solyc06g053480.2 2.0kb downstream 2.0kb downstream 6331 true SL2.50ch06: 36280533-36286863 Solanum lycopersicum
Solyc06g053480.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch06: 36284864-36286863 Solanum lycopersicum
Solyc06g053480.2 5.0kb upstream 5.0kb upstream 9331 true SL2.50ch06: 36275533-36284863 Solanum lycopersicum
Solyc06g053480.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch06: 36275533-36280532 Solanum lycopersicum
Solyc06g053480.2 5.0kb downstream 5.0kb downstream 9331 true SL2.50ch06: 36280533-36289863 Solanum lycopersicum
Solyc06g053480.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch06: 36284864-36289863 Solanum lycopersicum
Solyc06g053480.2 10.0kb upstream 10.0kb upstream 14331 true SL2.50ch06: 36270533-36284863 Solanum lycopersicum
Solyc06g053480.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch06: 36270533-36280532 Solanum lycopersicum
Solyc06g053480.2 10.0kb downstream 10.0kb downstream 14331 true SL2.50ch06: 36280533-36294863 Solanum lycopersicum
Solyc06g053480.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch06: 36284864-36294863 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121467185 5263 Asterids View MSA
123745832 5271 Pentapetalae View MSA
122789548 5272 Eudicot View MSA
122047247 5273 Angiosperm View MSA
121347152 5274 Embryophyte View MSA
123428838 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain