Gene : Solyc06g053430.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR13077:SF6 - 15 KDA SELENOPROTEIN Description:  selenoprotein (AHRD V1 ***- B0WAC9_CULQU); contains Interpro domain(s) IPR014912 Sep15/SelM redox
Genomic Order:  1105 Name:  ? Solyc06g053430.2
Secondary Identifier:  ? PAC:36128715
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc06g053430.2 0.5kb upstream 0.5kb upstream 6670 true SL2.50ch06: 36203883-36210552 Solanum lycopersicum
Solyc06g053430.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch06: 36203883-36204382 Solanum lycopersicum
Solyc06g053430.2 0.5kb downstream 0.5kb downstream 6670 true SL2.50ch06: 36204383-36211052 Solanum lycopersicum
Solyc06g053430.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch06: 36210553-36211052 Solanum lycopersicum
Solyc06g053430.2 1.0kb upstream 1.0kb upstream 7170 true SL2.50ch06: 36203383-36210552 Solanum lycopersicum
Solyc06g053430.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch06: 36203383-36204382 Solanum lycopersicum
Solyc06g053430.2 1.0kb downstream 1.0kb downstream 7170 true SL2.50ch06: 36204383-36211552 Solanum lycopersicum
Solyc06g053430.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch06: 36210553-36211552 Solanum lycopersicum
Solyc06g053430.2 2.0kb upstream 2.0kb upstream 8170 true SL2.50ch06: 36202383-36210552 Solanum lycopersicum
Solyc06g053430.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch06: 36202383-36204382 Solanum lycopersicum
Solyc06g053430.2 2.0kb downstream 2.0kb downstream 8170 true SL2.50ch06: 36204383-36212552 Solanum lycopersicum
Solyc06g053430.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch06: 36210553-36212552 Solanum lycopersicum
Solyc06g053430.2 5.0kb upstream 5.0kb upstream 11170 true SL2.50ch06: 36199383-36210552 Solanum lycopersicum
Solyc06g053430.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch06: 36199383-36204382 Solanum lycopersicum
Solyc06g053430.2 5.0kb downstream 5.0kb downstream 11170 true SL2.50ch06: 36204383-36215552 Solanum lycopersicum
Solyc06g053430.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch06: 36210553-36215552 Solanum lycopersicum
Solyc06g053430.2 10.0kb upstream 10.0kb upstream 16170 true SL2.50ch06: 36194383-36210552 Solanum lycopersicum
Solyc06g053430.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch06: 36194383-36204382 Solanum lycopersicum
Solyc06g053430.2 10.0kb downstream 10.0kb downstream 16170 true SL2.50ch06: 36204383-36220552 Solanum lycopersicum
Solyc06g053430.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch06: 36210553-36220552 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121466471 5263 Asterids View MSA
123736516 5271 Pentapetalae View MSA
122788983 5272 Eudicot View MSA
122044015 5273 Angiosperm View MSA
121346057 5274 Embryophyte View MSA
123424520 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain