Gene : Solyc06g053740.2 S. lycopersicum ITAG2.4
Defline:  (1 of 14) PF00917 - MATH domain (MATH) Description:  Ubiquitin carboxyl-terminal hydrolase (Fragment) (AHRD V1 *--- D8UG84_VOLCA); contains Interpro domain(s) IPR002083 MATH
Genomic Order:  1136 Name:  ? Solyc06g053740.2
Secondary Identifier:  ? PAC:36131223
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

Correlated Expression Displayer

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc06g053740.2 0.5kb upstream 0.5kb upstream 7560 true SL2.50ch06: 36590784-36598343 Solanum lycopersicum
Solyc06g053740.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch06: 36590784-36591283 Solanum lycopersicum
Solyc06g053740.2 0.5kb downstream 0.5kb downstream 7560 true SL2.50ch06: 36591284-36598843 Solanum lycopersicum
Solyc06g053740.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch06: 36598344-36598843 Solanum lycopersicum
Solyc06g053740.2 1.0kb upstream 1.0kb upstream 8060 true SL2.50ch06: 36590284-36598343 Solanum lycopersicum
Solyc06g053740.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch06: 36590284-36591283 Solanum lycopersicum
Solyc06g053740.2 1.0kb downstream 1.0kb downstream 8060 true SL2.50ch06: 36591284-36599343 Solanum lycopersicum
Solyc06g053740.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch06: 36598344-36599343 Solanum lycopersicum
Solyc06g053740.2 2.0kb upstream 2.0kb upstream 9060 true SL2.50ch06: 36589284-36598343 Solanum lycopersicum
Solyc06g053740.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch06: 36589284-36591283 Solanum lycopersicum
Solyc06g053740.2 2.0kb downstream 2.0kb downstream 9060 true SL2.50ch06: 36591284-36600343 Solanum lycopersicum
Solyc06g053740.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch06: 36598344-36600343 Solanum lycopersicum
Solyc06g053740.2 5.0kb upstream 5.0kb upstream 12060 true SL2.50ch06: 36586284-36598343 Solanum lycopersicum
Solyc06g053740.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch06: 36586284-36591283 Solanum lycopersicum
Solyc06g053740.2 5.0kb downstream 5.0kb downstream 12060 true SL2.50ch06: 36591284-36603343 Solanum lycopersicum
Solyc06g053740.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch06: 36598344-36603343 Solanum lycopersicum
Solyc06g053740.2 10.0kb upstream 10.0kb upstream 17060 true SL2.50ch06: 36581284-36598343 Solanum lycopersicum
Solyc06g053740.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch06: 36581284-36591283 Solanum lycopersicum
Solyc06g053740.2 10.0kb downstream 10.0kb downstream 17060 true SL2.50ch06: 36591284-36608343 Solanum lycopersicum
Solyc06g053740.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch06: 36598344-36608343 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026595 5273 Angiosperm View MSA
121479099 5263 Asterids View MSA
123741826 5271 Pentapetalae View MSA
122792639 5272 Eudicot View MSA
123429159 5275 Viridiplantae View MSA
121296410 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain