Gene : Solyc06g051960.2 S. lycopersicum ITAG2.4
Defline:  (1 of 2) PTHR31707:SF8 - PECTINESTERASE/PECTINESTERASE INHIBITOR 34-RELATED Description:  Pectinesterase (AHRD V1 ***- B9IDR8_POPTR); contains Interpro domain(s) IPR000070 Pectinesterase, catalytic
Genomic Order:  1057 Name:  ? Solyc06g051960.2
Secondary Identifier:  ? PAC:36129608
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum PWY-1081 Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc06g051960.2 0.5kb upstream 0.5kb upstream 3986 true SL2.50ch06: 35638028-35642013 Solanum lycopersicum
Solyc06g051960.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch06: 35638028-35638527 Solanum lycopersicum
Solyc06g051960.2 0.5kb downstream 0.5kb downstream 3986 true SL2.50ch06: 35638528-35642513 Solanum lycopersicum
Solyc06g051960.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch06: 35642014-35642513 Solanum lycopersicum
Solyc06g051960.2 1.0kb upstream 1.0kb upstream 4486 true SL2.50ch06: 35637528-35642013 Solanum lycopersicum
Solyc06g051960.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch06: 35637528-35638527 Solanum lycopersicum
Solyc06g051960.2 1.0kb downstream 1.0kb downstream 4486 true SL2.50ch06: 35638528-35643013 Solanum lycopersicum
Solyc06g051960.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch06: 35642014-35643013 Solanum lycopersicum
Solyc06g051960.2 2.0kb upstream 2.0kb upstream 5486 true SL2.50ch06: 35636528-35642013 Solanum lycopersicum
Solyc06g051960.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch06: 35636528-35638527 Solanum lycopersicum
Solyc06g051960.2 2.0kb downstream 2.0kb downstream 5486 true SL2.50ch06: 35638528-35644013 Solanum lycopersicum
Solyc06g051960.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch06: 35642014-35644013 Solanum lycopersicum
Solyc06g051960.2 5.0kb upstream 5.0kb upstream 8486 true SL2.50ch06: 35633528-35642013 Solanum lycopersicum
Solyc06g051960.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch06: 35633528-35638527 Solanum lycopersicum
Solyc06g051960.2 5.0kb downstream 5.0kb downstream 8486 true SL2.50ch06: 35638528-35647013 Solanum lycopersicum
Solyc06g051960.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch06: 35642014-35647013 Solanum lycopersicum
Solyc06g051960.2 10.0kb upstream 10.0kb upstream 13486 true SL2.50ch06: 35628528-35642013 Solanum lycopersicum
Solyc06g051960.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch06: 35628528-35638527 Solanum lycopersicum
Solyc06g051960.2 10.0kb downstream 10.0kb downstream 13486 true SL2.50ch06: 35638528-35652013 Solanum lycopersicum
Solyc06g051960.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch06: 35642014-35652013 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121481453 5263 Asterids View MSA
123746199 5271 Pentapetalae View MSA
122794152 5272 Eudicot View MSA
122043800 5273 Angiosperm View MSA
121350573 5274 Embryophyte View MSA
123381802 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain