Gene : Solyc06g062800.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR24031//PTHR24031:SF322 - RNA HELICASE // SUBFAMILY NOT NAMED Description:  ATP-dependent RNA helicase eIF4A (AHRD V1 ***- A8PG49_COPC7); contains Interpro domain(s) IPR011545 DNA/RNA helicase, DEAD/DEAH box type, N-terminal
Genomic Order:  1439 Name:  ? Solyc06g062800.2
Secondary Identifier:  ? PAC:36131046
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc06g062800.2 0.5kb upstream 0.5kb upstream 3541 true SL2.50ch06: 39623259-39626799 Solanum lycopersicum
Solyc06g062800.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch06: 39626300-39626799 Solanum lycopersicum
Solyc06g062800.2 0.5kb downstream 0.5kb downstream 3541 true SL2.50ch06: 39622759-39626299 Solanum lycopersicum
Solyc06g062800.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch06: 39622759-39623258 Solanum lycopersicum
Solyc06g062800.2 1.0kb upstream 1.0kb upstream 4041 true SL2.50ch06: 39623259-39627299 Solanum lycopersicum
Solyc06g062800.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch06: 39626300-39627299 Solanum lycopersicum
Solyc06g062800.2 1.0kb downstream 1.0kb downstream 4041 true SL2.50ch06: 39622259-39626299 Solanum lycopersicum
Solyc06g062800.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch06: 39622259-39623258 Solanum lycopersicum
Solyc06g062800.2 2.0kb upstream 2.0kb upstream 5041 true SL2.50ch06: 39623259-39628299 Solanum lycopersicum
Solyc06g062800.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch06: 39626300-39628299 Solanum lycopersicum
Solyc06g062800.2 2.0kb downstream 2.0kb downstream 5041 true SL2.50ch06: 39621259-39626299 Solanum lycopersicum
Solyc06g062800.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch06: 39621259-39623258 Solanum lycopersicum
Solyc06g062800.2 5.0kb upstream 5.0kb upstream 8041 true SL2.50ch06: 39623259-39631299 Solanum lycopersicum
Solyc06g062800.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch06: 39626300-39631299 Solanum lycopersicum
Solyc06g062800.2 5.0kb downstream 5.0kb downstream 8041 true SL2.50ch06: 39618259-39626299 Solanum lycopersicum
Solyc06g062800.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch06: 39618259-39623258 Solanum lycopersicum
Solyc06g062800.2 10.0kb upstream 10.0kb upstream 13041 true SL2.50ch06: 39623259-39636299 Solanum lycopersicum
Solyc06g062800.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch06: 39626300-39636299 Solanum lycopersicum
Solyc06g062800.2 10.0kb downstream 10.0kb downstream 13041 true SL2.50ch06: 39613259-39626299 Solanum lycopersicum
Solyc06g062800.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch06: 39613259-39623258 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121481446 5263 Asterids View MSA
123753006 5271 Pentapetalae View MSA
122788239 5272 Eudicot View MSA
122046690 5273 Angiosperm View MSA
121345295 5274 Embryophyte View MSA
123427522 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain