Gene : Solyc06g066780.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) K10803 - DNA-repair protein XRCC1 (XRCC1) Description:  DNA repair protein like XRCC1 (AHRD V1 ***- Q0WPZ1_ARATH); contains Interpro domain(s) IPR001357 BRCT
Genomic Order:  1733 Name:  ? Solyc06g066780.2
Secondary Identifier:  ? PAC:36129295
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc06g066780.2 0.5kb upstream 0.5kb upstream 5495 true SL2.50ch06: 41957500-41962994 Solanum lycopersicum
Solyc06g066780.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch06: 41957500-41957999 Solanum lycopersicum
Solyc06g066780.2 0.5kb downstream 0.5kb downstream 5495 true SL2.50ch06: 41958000-41963494 Solanum lycopersicum
Solyc06g066780.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch06: 41962995-41963494 Solanum lycopersicum
Solyc06g066780.2 1.0kb upstream 1.0kb upstream 5995 true SL2.50ch06: 41957000-41962994 Solanum lycopersicum
Solyc06g066780.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch06: 41957000-41957999 Solanum lycopersicum
Solyc06g066780.2 1.0kb downstream 1.0kb downstream 5995 true SL2.50ch06: 41958000-41963994 Solanum lycopersicum
Solyc06g066780.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch06: 41962995-41963994 Solanum lycopersicum
Solyc06g066780.2 2.0kb upstream 2.0kb upstream 6995 true SL2.50ch06: 41956000-41962994 Solanum lycopersicum
Solyc06g066780.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch06: 41956000-41957999 Solanum lycopersicum
Solyc06g066780.2 2.0kb downstream 2.0kb downstream 6995 true SL2.50ch06: 41958000-41964994 Solanum lycopersicum
Solyc06g066780.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch06: 41962995-41964994 Solanum lycopersicum
Solyc06g066780.2 5.0kb upstream 5.0kb upstream 9995 true SL2.50ch06: 41953000-41962994 Solanum lycopersicum
Solyc06g066780.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch06: 41953000-41957999 Solanum lycopersicum
Solyc06g066780.2 5.0kb downstream 5.0kb downstream 9995 true SL2.50ch06: 41958000-41967994 Solanum lycopersicum
Solyc06g066780.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch06: 41962995-41967994 Solanum lycopersicum
Solyc06g066780.2 10.0kb upstream 10.0kb upstream 14995 true SL2.50ch06: 41948000-41962994 Solanum lycopersicum
Solyc06g066780.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch06: 41948000-41957999 Solanum lycopersicum
Solyc06g066780.2 10.0kb downstream 10.0kb downstream 14995 true SL2.50ch06: 41958000-41972994 Solanum lycopersicum
Solyc06g066780.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch06: 41962995-41972994 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121474477 5263 Asterids View MSA
123745081 5271 Pentapetalae View MSA
122790473 5272 Eudicot View MSA
122046298 5273 Angiosperm View MSA
121347821 5274 Embryophyte View MSA
123380641 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain