Gene : Solyc06g066010.2 S. lycopersicum ITAG2.4
Defline:  (1 of 5) K02109 - F-type H+-transporting ATPase subunit b (ATPF0B, atpF) Description:  U11/U12 small nuclear ribonucleoprotein protein (AHRD V1 *-*- C1C3V0_RANCA); contains Interpro domain(s) IPR000626 Ubiquitin
Genomic Order:  1659 Name:  ? Solyc06g066010.2
Secondary Identifier:  ? PAC:36129404
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc06g066010.2 0.5kb upstream 0.5kb upstream 3738 true SL2.50ch06: 41364511-41368248 Solanum lycopersicum
Solyc06g066010.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch06: 41367749-41368248 Solanum lycopersicum
Solyc06g066010.2 0.5kb downstream 0.5kb downstream 3738 true SL2.50ch06: 41364011-41367748 Solanum lycopersicum
Solyc06g066010.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch06: 41364011-41364510 Solanum lycopersicum
Solyc06g066010.2 1.0kb upstream 1.0kb upstream 4238 true SL2.50ch06: 41364511-41368748 Solanum lycopersicum
Solyc06g066010.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch06: 41367749-41368748 Solanum lycopersicum
Solyc06g066010.2 1.0kb downstream 1.0kb downstream 4238 true SL2.50ch06: 41363511-41367748 Solanum lycopersicum
Solyc06g066010.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch06: 41363511-41364510 Solanum lycopersicum
Solyc06g066010.2 2.0kb upstream 2.0kb upstream 5238 true SL2.50ch06: 41364511-41369748 Solanum lycopersicum
Solyc06g066010.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch06: 41367749-41369748 Solanum lycopersicum
Solyc06g066010.2 2.0kb downstream 2.0kb downstream 5238 true SL2.50ch06: 41362511-41367748 Solanum lycopersicum
Solyc06g066010.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch06: 41362511-41364510 Solanum lycopersicum
Solyc06g066010.2 5.0kb upstream 5.0kb upstream 8238 true SL2.50ch06: 41364511-41372748 Solanum lycopersicum
Solyc06g066010.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch06: 41367749-41372748 Solanum lycopersicum
Solyc06g066010.2 5.0kb downstream 5.0kb downstream 8238 true SL2.50ch06: 41359511-41367748 Solanum lycopersicum
Solyc06g066010.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch06: 41359511-41364510 Solanum lycopersicum
Solyc06g066010.2 10.0kb upstream 10.0kb upstream 13238 true SL2.50ch06: 41364511-41377748 Solanum lycopersicum
Solyc06g066010.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch06: 41367749-41377748 Solanum lycopersicum
Solyc06g066010.2 10.0kb downstream 10.0kb downstream 13238 true SL2.50ch06: 41354511-41367748 Solanum lycopersicum
Solyc06g066010.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch06: 41354511-41364510 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121477500 5263 Asterids View MSA
123752628 5271 Pentapetalae View MSA
122791524 5272 Eudicot View MSA
122043205 5273 Angiosperm View MSA
121348620 5274 Embryophyte View MSA
123380941 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain