Gene : Solyc06g066390.1 S. lycopersicum ITAG2.4
Defline:  (1 of 164) PF00847 - AP2 domain (AP2) Description:  AP2-like ethylene-responsive transcription factor At1g16060 (AHRD V1 *-*- AP2L1_ARATH); contains Interpro domain(s) IPR001471 Pathogenesis-related transcriptional factor and ERF, DNA-binding
Genomic Order:  1696 Name:  ? Solyc06g066390.1
Secondary Identifier:  ? PAC:36129292
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc06g066390.1 0.5kb upstream 0.5kb upstream 2245 true SL2.50ch06: 41678778-41681022 Solanum lycopersicum
Solyc06g066390.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch06: 41678778-41679277 Solanum lycopersicum
Solyc06g066390.1 0.5kb downstream 0.5kb downstream 2245 true SL2.50ch06: 41679278-41681522 Solanum lycopersicum
Solyc06g066390.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch06: 41681023-41681522 Solanum lycopersicum
Solyc06g066390.1 1.0kb upstream 1.0kb upstream 2745 true SL2.50ch06: 41678278-41681022 Solanum lycopersicum
Solyc06g066390.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch06: 41678278-41679277 Solanum lycopersicum
Solyc06g066390.1 1.0kb downstream 1.0kb downstream 2745 true SL2.50ch06: 41679278-41682022 Solanum lycopersicum
Solyc06g066390.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch06: 41681023-41682022 Solanum lycopersicum
Solyc06g066390.1 2.0kb upstream 2.0kb upstream 3745 true SL2.50ch06: 41677278-41681022 Solanum lycopersicum
Solyc06g066390.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch06: 41677278-41679277 Solanum lycopersicum
Solyc06g066390.1 2.0kb downstream 2.0kb downstream 3745 true SL2.50ch06: 41679278-41683022 Solanum lycopersicum
Solyc06g066390.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch06: 41681023-41683022 Solanum lycopersicum
Solyc06g066390.1 5.0kb upstream 5.0kb upstream 6745 true SL2.50ch06: 41674278-41681022 Solanum lycopersicum
Solyc06g066390.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch06: 41674278-41679277 Solanum lycopersicum
Solyc06g066390.1 5.0kb downstream 5.0kb downstream 6745 true SL2.50ch06: 41679278-41686022 Solanum lycopersicum
Solyc06g066390.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch06: 41681023-41686022 Solanum lycopersicum
Solyc06g066390.1 10.0kb upstream 10.0kb upstream 11745 true SL2.50ch06: 41669278-41681022 Solanum lycopersicum
Solyc06g066390.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch06: 41669278-41679277 Solanum lycopersicum
Solyc06g066390.1 10.0kb downstream 10.0kb downstream 11745 true SL2.50ch06: 41679278-41691022 Solanum lycopersicum
Solyc06g066390.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch06: 41681023-41691022 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121477576 5263 Asterids View MSA
123749624 5271 Pentapetalae View MSA
122795805 5272 Eudicot View MSA
122048142 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121350345 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain