Gene : Solyc06g071310.2 S. lycopersicum ITAG2.4
Defline:  (1 of 11) K09377 - cysteine and glycine-rich protein (CSRP) Description:  LIM domain protein (AHRD V1 **-- Q306K1_BRANA); contains Interpro domain(s) IPR001781 Zinc finger, LIM-type
Genomic Order:  1987 Name:  ? Solyc06g071310.2
Secondary Identifier:  ? PAC:36130267
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc06g071310.2 0.5kb upstream 0.5kb upstream 3748 true SL2.50ch06: 43880883-43884630 Solanum lycopersicum
Solyc06g071310.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch06: 43880883-43881382 Solanum lycopersicum
Solyc06g071310.2 0.5kb downstream 0.5kb downstream 3748 true SL2.50ch06: 43881383-43885130 Solanum lycopersicum
Solyc06g071310.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch06: 43884631-43885130 Solanum lycopersicum
Solyc06g071310.2 1.0kb upstream 1.0kb upstream 4248 true SL2.50ch06: 43880383-43884630 Solanum lycopersicum
Solyc06g071310.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch06: 43880383-43881382 Solanum lycopersicum
Solyc06g071310.2 1.0kb downstream 1.0kb downstream 4248 true SL2.50ch06: 43881383-43885630 Solanum lycopersicum
Solyc06g071310.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch06: 43884631-43885630 Solanum lycopersicum
Solyc06g071310.2 2.0kb upstream 2.0kb upstream 5248 true SL2.50ch06: 43879383-43884630 Solanum lycopersicum
Solyc06g071310.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch06: 43879383-43881382 Solanum lycopersicum
Solyc06g071310.2 2.0kb downstream 2.0kb downstream 5248 true SL2.50ch06: 43881383-43886630 Solanum lycopersicum
Solyc06g071310.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch06: 43884631-43886630 Solanum lycopersicum
Solyc06g071310.2 5.0kb upstream 5.0kb upstream 8248 true SL2.50ch06: 43876383-43884630 Solanum lycopersicum
Solyc06g071310.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch06: 43876383-43881382 Solanum lycopersicum
Solyc06g071310.2 5.0kb downstream 5.0kb downstream 8248 true SL2.50ch06: 43881383-43889630 Solanum lycopersicum
Solyc06g071310.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch06: 43884631-43889630 Solanum lycopersicum
Solyc06g071310.2 10.0kb upstream 10.0kb upstream 13248 true SL2.50ch06: 43871383-43884630 Solanum lycopersicum
Solyc06g071310.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch06: 43871383-43881382 Solanum lycopersicum
Solyc06g071310.2 10.0kb downstream 10.0kb downstream 13248 true SL2.50ch06: 43881383-43894630 Solanum lycopersicum
Solyc06g071310.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch06: 43884631-43894630 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121470515 5263 Asterids View MSA
123745629 5271 Pentapetalae View MSA
122793915 5272 Eudicot View MSA
122049992 5273 Angiosperm View MSA
121348284 5274 Embryophyte View MSA
123426269 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain