Gene : Solyc06g069520.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR13193 - CGI-140 Description:  UPF0139 membrane protein At5g07960 (AHRD V1 ***- U139_ARATH); contains Interpro domain(s) IPR005351 Uncharacterised protein family UPF0139
Genomic Order:  1908 Name:  ? Solyc06g069520.2
Secondary Identifier:  ? PAC:36129999
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc06g069520.2 0.5kb upstream 0.5kb upstream 3186 true SL2.50ch06: 43291605-43294790 Solanum lycopersicum
Solyc06g069520.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch06: 43291605-43292104 Solanum lycopersicum
Solyc06g069520.2 0.5kb downstream 0.5kb downstream 3186 true SL2.50ch06: 43292105-43295290 Solanum lycopersicum
Solyc06g069520.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch06: 43294791-43295290 Solanum lycopersicum
Solyc06g069520.2 1.0kb upstream 1.0kb upstream 3686 true SL2.50ch06: 43291105-43294790 Solanum lycopersicum
Solyc06g069520.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch06: 43291105-43292104 Solanum lycopersicum
Solyc06g069520.2 1.0kb downstream 1.0kb downstream 3686 true SL2.50ch06: 43292105-43295790 Solanum lycopersicum
Solyc06g069520.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch06: 43294791-43295790 Solanum lycopersicum
Solyc06g069520.2 2.0kb upstream 2.0kb upstream 4686 true SL2.50ch06: 43290105-43294790 Solanum lycopersicum
Solyc06g069520.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch06: 43290105-43292104 Solanum lycopersicum
Solyc06g069520.2 2.0kb downstream 2.0kb downstream 4686 true SL2.50ch06: 43292105-43296790 Solanum lycopersicum
Solyc06g069520.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch06: 43294791-43296790 Solanum lycopersicum
Solyc06g069520.2 5.0kb upstream 5.0kb upstream 7686 true SL2.50ch06: 43287105-43294790 Solanum lycopersicum
Solyc06g069520.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch06: 43287105-43292104 Solanum lycopersicum
Solyc06g069520.2 5.0kb downstream 5.0kb downstream 7686 true SL2.50ch06: 43292105-43299790 Solanum lycopersicum
Solyc06g069520.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch06: 43294791-43299790 Solanum lycopersicum
Solyc06g069520.2 10.0kb upstream 10.0kb upstream 12686 true SL2.50ch06: 43282105-43294790 Solanum lycopersicum
Solyc06g069520.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch06: 43282105-43292104 Solanum lycopersicum
Solyc06g069520.2 10.0kb downstream 10.0kb downstream 12686 true SL2.50ch06: 43292105-43304790 Solanum lycopersicum
Solyc06g069520.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch06: 43294791-43304790 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121468162 5263 Asterids View MSA
123737363 5271 Pentapetalae View MSA
122786420 5272 Eudicot View MSA
122043148 5273 Angiosperm View MSA
121344869 5274 Embryophyte View MSA
123425690 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain