Gene : Solyc06g069230.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) K08735 - DNA mismatch repair protein MSH2 (MSH2) Description:  DNA mismatch repair protein muts (AHRD V1 ***- D2V0B3_NAEGR); contains Interpro domain(s) IPR011184 DNA mismatch repair protein, MSH2
Genomic Order:  1879 Name:  ? Solyc06g069230.2
Secondary Identifier:  ? PAC:36128695
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

Correlated Expression Displayer

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc06g069230.2 0.5kb upstream 0.5kb upstream 7663 true SL2.50ch06: 42988321-42995983 Solanum lycopersicum
Solyc06g069230.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch06: 42995484-42995983 Solanum lycopersicum
Solyc06g069230.2 0.5kb downstream 0.5kb downstream 7663 true SL2.50ch06: 42987821-42995483 Solanum lycopersicum
Solyc06g069230.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch06: 42987821-42988320 Solanum lycopersicum
Solyc06g069230.2 1.0kb upstream 1.0kb upstream 8163 true SL2.50ch06: 42988321-42996483 Solanum lycopersicum
Solyc06g069230.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch06: 42995484-42996483 Solanum lycopersicum
Solyc06g069230.2 1.0kb downstream 1.0kb downstream 8163 true SL2.50ch06: 42987321-42995483 Solanum lycopersicum
Solyc06g069230.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch06: 42987321-42988320 Solanum lycopersicum
Solyc06g069230.2 2.0kb upstream 2.0kb upstream 9163 true SL2.50ch06: 42988321-42997483 Solanum lycopersicum
Solyc06g069230.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch06: 42995484-42997483 Solanum lycopersicum
Solyc06g069230.2 2.0kb downstream 2.0kb downstream 9163 true SL2.50ch06: 42986321-42995483 Solanum lycopersicum
Solyc06g069230.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch06: 42986321-42988320 Solanum lycopersicum
Solyc06g069230.2 5.0kb upstream 5.0kb upstream 12163 true SL2.50ch06: 42988321-43000483 Solanum lycopersicum
Solyc06g069230.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch06: 42995484-43000483 Solanum lycopersicum
Solyc06g069230.2 5.0kb downstream 5.0kb downstream 12163 true SL2.50ch06: 42983321-42995483 Solanum lycopersicum
Solyc06g069230.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch06: 42983321-42988320 Solanum lycopersicum
Solyc06g069230.2 10.0kb upstream 10.0kb upstream 17163 true SL2.50ch06: 42988321-43005483 Solanum lycopersicum
Solyc06g069230.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch06: 42995484-43005483 Solanum lycopersicum
Solyc06g069230.2 10.0kb downstream 10.0kb downstream 17163 true SL2.50ch06: 42978321-42995483 Solanum lycopersicum
Solyc06g069230.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch06: 42978321-42988320 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121472185 5263 Asterids View MSA
123740546 5271 Pentapetalae View MSA
122786206 5272 Eudicot View MSA
122042672 5273 Angiosperm View MSA
121343804 5274 Embryophyte View MSA
123423885 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain