Gene : Solyc06g068340.1 S. lycopersicum ITAG2.4
Defline:  (1 of 24) PF03140 - Plant protein of unknown function (DUF247) Description:  Pentatricopeptide (PPR) repeat-containing protein-like (AHRD V1 **-- Q6ZCP9_ORYSJ); contains Interpro domain(s) IPR004158 Protein of unknown function DUF247, plant
Genomic Order:  1790 Name:  ? Solyc06g068340.1
Secondary Identifier:  ? PAC:36129523
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc06g068340.1 0.5kb upstream 0.5kb upstream 2339 true SL2.50ch06: 42338581-42340919 Solanum lycopersicum
Solyc06g068340.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch06: 42338581-42339080 Solanum lycopersicum
Solyc06g068340.1 0.5kb downstream 0.5kb downstream 2339 true SL2.50ch06: 42339081-42341419 Solanum lycopersicum
Solyc06g068340.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch06: 42340920-42341419 Solanum lycopersicum
Solyc06g068340.1 1.0kb upstream 1.0kb upstream 2839 true SL2.50ch06: 42338081-42340919 Solanum lycopersicum
Solyc06g068340.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch06: 42338081-42339080 Solanum lycopersicum
Solyc06g068340.1 1.0kb downstream 1.0kb downstream 2839 true SL2.50ch06: 42339081-42341919 Solanum lycopersicum
Solyc06g068340.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch06: 42340920-42341919 Solanum lycopersicum
Solyc06g068340.1 2.0kb upstream 2.0kb upstream 3839 true SL2.50ch06: 42337081-42340919 Solanum lycopersicum
Solyc06g068340.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch06: 42337081-42339080 Solanum lycopersicum
Solyc06g068340.1 2.0kb downstream 2.0kb downstream 3839 true SL2.50ch06: 42339081-42342919 Solanum lycopersicum
Solyc06g068340.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch06: 42340920-42342919 Solanum lycopersicum
Solyc06g068340.1 5.0kb upstream 5.0kb upstream 6839 true SL2.50ch06: 42334081-42340919 Solanum lycopersicum
Solyc06g068340.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch06: 42334081-42339080 Solanum lycopersicum
Solyc06g068340.1 5.0kb downstream 5.0kb downstream 6839 true SL2.50ch06: 42339081-42345919 Solanum lycopersicum
Solyc06g068340.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch06: 42340920-42345919 Solanum lycopersicum
Solyc06g068340.1 10.0kb upstream 10.0kb upstream 11839 true SL2.50ch06: 42329081-42340919 Solanum lycopersicum
Solyc06g068340.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch06: 42329081-42339080 Solanum lycopersicum
Solyc06g068340.1 10.0kb downstream 10.0kb downstream 11839 true SL2.50ch06: 42339081-42350919 Solanum lycopersicum
Solyc06g068340.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch06: 42340920-42350919 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121477756 5263 Asterids View MSA
123747336 5271 Pentapetalae View MSA
122785819 5272 Eudicot View MSA
122047273 5273 Angiosperm View MSA
121351531 5274 Embryophyte View MSA
123382209 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain