Gene : Solyc06g073530.1 S. lycopersicum ITAG2.4
Defline:  (1 of 3) PTHR22891//PTHR22891:SF51 - EUKARYOTIC TRANSLATION INITIATION FACTOR 2C // SUBFAMILY NOT NAMED Description:  Argonaute 4-like protein (AHRD V1 ***- D5FQ91_PELHO); contains Interpro domain(s) IPR003165 Stem cell self-renewal protein Piwi
Genomic Order:  2207 Name:  ? Solyc06g073530.1
Secondary Identifier:  ? PAC:36130493
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Ontology Annotation Displayer

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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc06g073530.1 0.5kb upstream 0.5kb upstream 5475 true SL2.50ch06: 45326652-45332126 Solanum lycopersicum
Solyc06g073530.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch06: 45326652-45327151 Solanum lycopersicum
Solyc06g073530.1 0.5kb downstream 0.5kb downstream 5475 true SL2.50ch06: 45327152-45332626 Solanum lycopersicum
Solyc06g073530.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch06: 45332127-45332626 Solanum lycopersicum
Solyc06g073530.1 1.0kb upstream 1.0kb upstream 5975 true SL2.50ch06: 45326152-45332126 Solanum lycopersicum
Solyc06g073530.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch06: 45326152-45327151 Solanum lycopersicum
Solyc06g073530.1 1.0kb downstream 1.0kb downstream 5975 true SL2.50ch06: 45327152-45333126 Solanum lycopersicum
Solyc06g073530.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch06: 45332127-45333126 Solanum lycopersicum
Solyc06g073530.1 2.0kb upstream 2.0kb upstream 6975 true SL2.50ch06: 45325152-45332126 Solanum lycopersicum
Solyc06g073530.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch06: 45325152-45327151 Solanum lycopersicum
Solyc06g073530.1 2.0kb downstream 2.0kb downstream 6975 true SL2.50ch06: 45327152-45334126 Solanum lycopersicum
Solyc06g073530.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch06: 45332127-45334126 Solanum lycopersicum
Solyc06g073530.1 5.0kb upstream 5.0kb upstream 9975 true SL2.50ch06: 45322152-45332126 Solanum lycopersicum
Solyc06g073530.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch06: 45322152-45327151 Solanum lycopersicum
Solyc06g073530.1 5.0kb downstream 5.0kb downstream 9975 true SL2.50ch06: 45327152-45337126 Solanum lycopersicum
Solyc06g073530.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch06: 45332127-45337126 Solanum lycopersicum
Solyc06g073530.1 10.0kb upstream 10.0kb upstream 14975 true SL2.50ch06: 45317152-45332126 Solanum lycopersicum
Solyc06g073530.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch06: 45317152-45327151 Solanum lycopersicum
Solyc06g073530.1 10.0kb downstream 10.0kb downstream 14975 true SL2.50ch06: 45327152-45342126 Solanum lycopersicum
Solyc06g073530.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch06: 45332127-45342126 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027856 5273 Angiosperm View MSA
121368474 5263 Asterids Singleton cluster - no MSA
123749458 5271 Pentapetalae View MSA
122795022 5272 Eudicot View MSA
121349761 5274 Embryophyte View MSA
123381432 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain