Gene : Solyc06g073340.2 S. lycopersicum ITAG2.4
Defline:  (1 of 2) PTHR11685:SF135 - E3 UBIQUITIN-PROTEIN LIGASE ARI10-RELATED Description:  Ariadne-like ubiquitin ligase (AHRD V1 **-* D3AZ84_POLPA); contains Interpro domain(s) IPR002867 Zinc finger, C6HC-type
Genomic Order:  2188 Name:  ? Solyc06g073340.2
Secondary Identifier:  ? PAC:36130127
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum PWY-7511 Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc06g073340.2 0.5kb upstream 0.5kb upstream 8201 true SL2.50ch06: 45191373-45199573 Solanum lycopersicum
Solyc06g073340.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch06: 45191373-45191872 Solanum lycopersicum
Solyc06g073340.2 0.5kb downstream 0.5kb downstream 8201 true SL2.50ch06: 45191873-45200073 Solanum lycopersicum
Solyc06g073340.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch06: 45199574-45200073 Solanum lycopersicum
Solyc06g073340.2 1.0kb upstream 1.0kb upstream 8701 true SL2.50ch06: 45190873-45199573 Solanum lycopersicum
Solyc06g073340.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch06: 45190873-45191872 Solanum lycopersicum
Solyc06g073340.2 1.0kb downstream 1.0kb downstream 8701 true SL2.50ch06: 45191873-45200573 Solanum lycopersicum
Solyc06g073340.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch06: 45199574-45200573 Solanum lycopersicum
Solyc06g073340.2 2.0kb upstream 2.0kb upstream 9701 true SL2.50ch06: 45189873-45199573 Solanum lycopersicum
Solyc06g073340.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch06: 45189873-45191872 Solanum lycopersicum
Solyc06g073340.2 2.0kb downstream 2.0kb downstream 9701 true SL2.50ch06: 45191873-45201573 Solanum lycopersicum
Solyc06g073340.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch06: 45199574-45201573 Solanum lycopersicum
Solyc06g073340.2 5.0kb upstream 5.0kb upstream 12701 true SL2.50ch06: 45186873-45199573 Solanum lycopersicum
Solyc06g073340.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch06: 45186873-45191872 Solanum lycopersicum
Solyc06g073340.2 5.0kb downstream 5.0kb downstream 12701 true SL2.50ch06: 45191873-45204573 Solanum lycopersicum
Solyc06g073340.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch06: 45199574-45204573 Solanum lycopersicum
Solyc06g073340.2 10.0kb upstream 10.0kb upstream 17701 true SL2.50ch06: 45181873-45199573 Solanum lycopersicum
Solyc06g073340.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch06: 45181873-45191872 Solanum lycopersicum
Solyc06g073340.2 10.0kb downstream 10.0kb downstream 17701 true SL2.50ch06: 45191873-45209573 Solanum lycopersicum
Solyc06g073340.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch06: 45199574-45209573 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121476532 5263 Asterids View MSA
123742457 5271 Pentapetalae View MSA
122787924 5272 Eudicot View MSA
122045508 5273 Angiosperm View MSA
121343931 5274 Embryophyte View MSA
123428000 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain