Gene : Solyc06g076480.2 S. lycopersicum ITAG2.4
Defline:  (1 of 2) PF00805 - Pentapeptide repeats (8 copies) (Pentapeptide) Description:  Pentapeptide repeat-containing protein (AHRD V1 *-*- D8G5N8_9CYAN); contains Interpro domain(s) IPR001646 Pentapeptide repeat
Genomic Order:  2501 Name:  ? Solyc06g076480.2
Secondary Identifier:  ? PAC:36128543
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Ontology Annotation Displayer

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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc06g076480.2 0.5kb upstream 0.5kb upstream 2315 true SL2.50ch06: 47515169-47517483 Solanum lycopersicum
Solyc06g076480.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch06: 47516984-47517483 Solanum lycopersicum
Solyc06g076480.2 0.5kb downstream 0.5kb downstream 2315 true SL2.50ch06: 47514669-47516983 Solanum lycopersicum
Solyc06g076480.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch06: 47514669-47515168 Solanum lycopersicum
Solyc06g076480.2 1.0kb upstream 1.0kb upstream 2815 true SL2.50ch06: 47515169-47517983 Solanum lycopersicum
Solyc06g076480.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch06: 47516984-47517983 Solanum lycopersicum
Solyc06g076480.2 1.0kb downstream 1.0kb downstream 2815 true SL2.50ch06: 47514169-47516983 Solanum lycopersicum
Solyc06g076480.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch06: 47514169-47515168 Solanum lycopersicum
Solyc06g076480.2 2.0kb upstream 2.0kb upstream 3815 true SL2.50ch06: 47515169-47518983 Solanum lycopersicum
Solyc06g076480.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch06: 47516984-47518983 Solanum lycopersicum
Solyc06g076480.2 2.0kb downstream 2.0kb downstream 3815 true SL2.50ch06: 47513169-47516983 Solanum lycopersicum
Solyc06g076480.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch06: 47513169-47515168 Solanum lycopersicum
Solyc06g076480.2 5.0kb upstream 5.0kb upstream 6815 true SL2.50ch06: 47515169-47521983 Solanum lycopersicum
Solyc06g076480.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch06: 47516984-47521983 Solanum lycopersicum
Solyc06g076480.2 5.0kb downstream 5.0kb downstream 6815 true SL2.50ch06: 47510169-47516983 Solanum lycopersicum
Solyc06g076480.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch06: 47510169-47515168 Solanum lycopersicum
Solyc06g076480.2 10.0kb upstream 10.0kb upstream 11815 true SL2.50ch06: 47515169-47526983 Solanum lycopersicum
Solyc06g076480.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch06: 47516984-47526983 Solanum lycopersicum
Solyc06g076480.2 10.0kb downstream 10.0kb downstream 11815 true SL2.50ch06: 47505169-47516983 Solanum lycopersicum
Solyc06g076480.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch06: 47505169-47515168 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121468664 5263 Asterids View MSA
123737641 5271 Pentapetalae View MSA
122793224 5272 Eudicot View MSA
122045781 5273 Angiosperm View MSA
121346461 5274 Embryophyte View MSA
123426937 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain