Gene : Solyc06g082000.2 S. lycopersicum ITAG2.4
Defline:  (1 of 7) K05857 - phosphatidylinositol phospholipase C, delta (PLCD) Description:  1-phosphatidylinositol-4 5-bisphosphate phosphodiesterase (Phosphoinositide-specific phospholipase c) (AHRD V1 **** O49950_SOLTU); contains Interpro domain(s) IPR001711 Phospholipase C, phosphatidylinositol-specific, Y domain IPR018029 C2 membrane targeting protein IPR000909 Phospholipase C, phosphatidylinositol-specific , X region
Genomic Order:  2552 Name:  ? Solyc06g082000.2
Secondary Identifier:  ? PAC:36131077
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum LIPASYN-PWY Solanum lycopersicum pathologic  
Slycopersicum PWY-6351 Solanum lycopersicum pathologic  
Slycopersicum PWY-6367 Solanum lycopersicum pathologic  
Slycopersicum PWY-7039 Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc06g082000.2 0.5kb upstream 0.5kb upstream 3742 true SL2.50ch06: 47952533-47956274 Solanum lycopersicum
Solyc06g082000.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch06: 47952533-47953032 Solanum lycopersicum
Solyc06g082000.2 0.5kb downstream 0.5kb downstream 3742 true SL2.50ch06: 47953033-47956774 Solanum lycopersicum
Solyc06g082000.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch06: 47956275-47956774 Solanum lycopersicum
Solyc06g082000.2 1.0kb upstream 1.0kb upstream 4242 true SL2.50ch06: 47952033-47956274 Solanum lycopersicum
Solyc06g082000.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch06: 47952033-47953032 Solanum lycopersicum
Solyc06g082000.2 1.0kb downstream 1.0kb downstream 4242 true SL2.50ch06: 47953033-47957274 Solanum lycopersicum
Solyc06g082000.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch06: 47956275-47957274 Solanum lycopersicum
Solyc06g082000.2 2.0kb upstream 2.0kb upstream 5242 true SL2.50ch06: 47951033-47956274 Solanum lycopersicum
Solyc06g082000.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch06: 47951033-47953032 Solanum lycopersicum
Solyc06g082000.2 2.0kb downstream 2.0kb downstream 5242 true SL2.50ch06: 47953033-47958274 Solanum lycopersicum
Solyc06g082000.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch06: 47956275-47958274 Solanum lycopersicum
Solyc06g082000.2 5.0kb upstream 5.0kb upstream 8242 true SL2.50ch06: 47948033-47956274 Solanum lycopersicum
Solyc06g082000.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch06: 47948033-47953032 Solanum lycopersicum
Solyc06g082000.2 5.0kb downstream 5.0kb downstream 8242 true SL2.50ch06: 47953033-47961274 Solanum lycopersicum
Solyc06g082000.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch06: 47956275-47961274 Solanum lycopersicum
Solyc06g082000.2 10.0kb upstream 10.0kb upstream 13242 true SL2.50ch06: 47943033-47956274 Solanum lycopersicum
Solyc06g082000.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch06: 47943033-47953032 Solanum lycopersicum
Solyc06g082000.2 10.0kb downstream 10.0kb downstream 13242 true SL2.50ch06: 47953033-47966274 Solanum lycopersicum
Solyc06g082000.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch06: 47956275-47966274 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121482934 5263 Asterids View MSA
123747750 5271 Pentapetalae View MSA
122786994 5272 Eudicot View MSA
122046719 5273 Angiosperm View MSA
121351735 5274 Embryophyte View MSA
123428200 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain