Gene : Solyc06g076980.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR12203:SF13 - F10K1.7 PROTEIN Description:  Glycosyltransferase CAZy family GT90 (Fragment) (AHRD V1 **-- D8RT95_SELML); contains Interpro domain(s) IPR008539 Protein of unknown function DUF821, CAP10-like
Genomic Order:  2549 Name:  ? Solyc06g076980.2
Secondary Identifier:  ? PAC:36128465
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc06g076980.2 0.5kb upstream 0.5kb upstream 2946 true SL2.50ch06: 47837941-47840886 Solanum lycopersicum
Solyc06g076980.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch06: 47837941-47838440 Solanum lycopersicum
Solyc06g076980.2 0.5kb downstream 0.5kb downstream 2946 true SL2.50ch06: 47838441-47841386 Solanum lycopersicum
Solyc06g076980.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch06: 47840887-47841386 Solanum lycopersicum
Solyc06g076980.2 1.0kb upstream 1.0kb upstream 3446 true SL2.50ch06: 47837441-47840886 Solanum lycopersicum
Solyc06g076980.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch06: 47837441-47838440 Solanum lycopersicum
Solyc06g076980.2 1.0kb downstream 1.0kb downstream 3446 true SL2.50ch06: 47838441-47841886 Solanum lycopersicum
Solyc06g076980.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch06: 47840887-47841886 Solanum lycopersicum
Solyc06g076980.2 2.0kb upstream 2.0kb upstream 4446 true SL2.50ch06: 47836441-47840886 Solanum lycopersicum
Solyc06g076980.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch06: 47836441-47838440 Solanum lycopersicum
Solyc06g076980.2 2.0kb downstream 2.0kb downstream 4446 true SL2.50ch06: 47838441-47842886 Solanum lycopersicum
Solyc06g076980.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch06: 47840887-47842886 Solanum lycopersicum
Solyc06g076980.2 5.0kb upstream 5.0kb upstream 7446 true SL2.50ch06: 47833441-47840886 Solanum lycopersicum
Solyc06g076980.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch06: 47833441-47838440 Solanum lycopersicum
Solyc06g076980.2 5.0kb downstream 5.0kb downstream 7446 true SL2.50ch06: 47838441-47845886 Solanum lycopersicum
Solyc06g076980.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch06: 47840887-47845886 Solanum lycopersicum
Solyc06g076980.2 10.0kb upstream 10.0kb upstream 12446 true SL2.50ch06: 47828441-47840886 Solanum lycopersicum
Solyc06g076980.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch06: 47828441-47838440 Solanum lycopersicum
Solyc06g076980.2 10.0kb downstream 10.0kb downstream 12446 true SL2.50ch06: 47838441-47850886 Solanum lycopersicum
Solyc06g076980.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch06: 47840887-47850886 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121481397 5263 Asterids View MSA
123741113 5271 Pentapetalae View MSA
122789172 5272 Eudicot View MSA
122042631 5273 Angiosperm View MSA
121309992 5274 Embryophyte View MSA
123428833 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain