Gene : Solyc06g075790.2 S. lycopersicum ITAG2.4
Defline:  (1 of 34) PF16135 - TPL-binding domain in jasmonate signalling (Jas) Description:  Genomic DNA chromosome 5 P1 clone MMN10 (AHRD V1 **-- Q9FJF2_ARATH)
Genomic Order:  2432 Name:  ? Solyc06g075790.2
Secondary Identifier:  ? PAC:36129128
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc06g075790.2 0.5kb upstream 0.5kb upstream 3539 true SL2.50ch06: 47096759-47100297 Solanum lycopersicum
Solyc06g075790.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch06: 47096759-47097258 Solanum lycopersicum
Solyc06g075790.2 0.5kb downstream 0.5kb downstream 3539 true SL2.50ch06: 47097259-47100797 Solanum lycopersicum
Solyc06g075790.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch06: 47100298-47100797 Solanum lycopersicum
Solyc06g075790.2 1.0kb upstream 1.0kb upstream 4039 true SL2.50ch06: 47096259-47100297 Solanum lycopersicum
Solyc06g075790.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch06: 47096259-47097258 Solanum lycopersicum
Solyc06g075790.2 1.0kb downstream 1.0kb downstream 4039 true SL2.50ch06: 47097259-47101297 Solanum lycopersicum
Solyc06g075790.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch06: 47100298-47101297 Solanum lycopersicum
Solyc06g075790.2 2.0kb upstream 2.0kb upstream 5039 true SL2.50ch06: 47095259-47100297 Solanum lycopersicum
Solyc06g075790.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch06: 47095259-47097258 Solanum lycopersicum
Solyc06g075790.2 2.0kb downstream 2.0kb downstream 5039 true SL2.50ch06: 47097259-47102297 Solanum lycopersicum
Solyc06g075790.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch06: 47100298-47102297 Solanum lycopersicum
Solyc06g075790.2 5.0kb upstream 5.0kb upstream 8039 true SL2.50ch06: 47092259-47100297 Solanum lycopersicum
Solyc06g075790.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch06: 47092259-47097258 Solanum lycopersicum
Solyc06g075790.2 5.0kb downstream 5.0kb downstream 8039 true SL2.50ch06: 47097259-47105297 Solanum lycopersicum
Solyc06g075790.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch06: 47100298-47105297 Solanum lycopersicum
Solyc06g075790.2 10.0kb upstream 10.0kb upstream 13039 true SL2.50ch06: 47087259-47100297 Solanum lycopersicum
Solyc06g075790.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch06: 47087259-47097258 Solanum lycopersicum
Solyc06g075790.2 10.0kb downstream 10.0kb downstream 13039 true SL2.50ch06: 47097259-47110297 Solanum lycopersicum
Solyc06g075790.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch06: 47100298-47110297 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121470868 5263 Asterids View MSA
123747463 5271 Pentapetalae View MSA
122794643 5272 Eudicot View MSA
122051104 5273 Angiosperm View MSA
121312296 5274 Embryophyte View MSA
123349483 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain