Gene : Solyc06g074980.2 S. lycopersicum ITAG2.4
Defline:  (1 of 5) K13525 - transitional endoplasmic reticulum ATPase (VCP, CDC48) Description:  26S protease regulatory subunit 6B homolog (AHRD V1 *--- PRS6B_ARATH); contains Interpro domain(s) IPR005938 ATPase, AAA-type, CDC48
Genomic Order:  2352 Name:  ? Solyc06g074980.2
Secondary Identifier:  ? PAC:36128954
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc06g074980.2 0.5kb upstream 0.5kb upstream 7477 true SL2.50ch06: 46478289-46485765 Solanum lycopersicum
Solyc06g074980.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch06: 46478289-46478788 Solanum lycopersicum
Solyc06g074980.2 0.5kb downstream 0.5kb downstream 7477 true SL2.50ch06: 46478789-46486265 Solanum lycopersicum
Solyc06g074980.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch06: 46485766-46486265 Solanum lycopersicum
Solyc06g074980.2 1.0kb upstream 1.0kb upstream 7977 true SL2.50ch06: 46477789-46485765 Solanum lycopersicum
Solyc06g074980.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch06: 46477789-46478788 Solanum lycopersicum
Solyc06g074980.2 1.0kb downstream 1.0kb downstream 7977 true SL2.50ch06: 46478789-46486765 Solanum lycopersicum
Solyc06g074980.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch06: 46485766-46486765 Solanum lycopersicum
Solyc06g074980.2 2.0kb upstream 2.0kb upstream 8977 true SL2.50ch06: 46476789-46485765 Solanum lycopersicum
Solyc06g074980.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch06: 46476789-46478788 Solanum lycopersicum
Solyc06g074980.2 2.0kb downstream 2.0kb downstream 8977 true SL2.50ch06: 46478789-46487765 Solanum lycopersicum
Solyc06g074980.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch06: 46485766-46487765 Solanum lycopersicum
Solyc06g074980.2 5.0kb upstream 5.0kb upstream 11977 true SL2.50ch06: 46473789-46485765 Solanum lycopersicum
Solyc06g074980.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch06: 46473789-46478788 Solanum lycopersicum
Solyc06g074980.2 5.0kb downstream 5.0kb downstream 11977 true SL2.50ch06: 46478789-46490765 Solanum lycopersicum
Solyc06g074980.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch06: 46485766-46490765 Solanum lycopersicum
Solyc06g074980.2 10.0kb upstream 10.0kb upstream 16977 true SL2.50ch06: 46468789-46485765 Solanum lycopersicum
Solyc06g074980.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch06: 46468789-46478788 Solanum lycopersicum
Solyc06g074980.2 10.0kb downstream 10.0kb downstream 16977 true SL2.50ch06: 46478789-46495765 Solanum lycopersicum
Solyc06g074980.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch06: 46485766-46495765 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121480810 5263 Asterids View MSA
123746983 5271 Pentapetalae View MSA
122795799 5272 Eudicot View MSA
122048605 5273 Angiosperm View MSA
121347913 5274 Embryophyte View MSA
123424841 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain