Gene : Solyc06g074240.1 S. lycopersicum ITAG2.4
Defline:  (1 of 1) K14594 - neoxanthin synthase (NSY) Description:  Chromoplast-specific lycopene beta-cyclase
Genomic Order:  2278 Name:  ? Solyc06g074240.1
Secondary Identifier:  ? PAC:36130931
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum PWY-6809 Solanum lycopersicum pathologic  
Slycopersicum PWY-695 Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc06g074240.1 0.5kb upstream 0.5kb upstream 1997 true SL2.50ch06: 45898227-45900223 Solanum lycopersicum
Solyc06g074240.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch06: 45899724-45900223 Solanum lycopersicum
Solyc06g074240.1 0.5kb downstream 0.5kb downstream 1997 true SL2.50ch06: 45897727-45899723 Solanum lycopersicum
Solyc06g074240.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch06: 45897727-45898226 Solanum lycopersicum
Solyc06g074240.1 1.0kb upstream 1.0kb upstream 2497 true SL2.50ch06: 45898227-45900723 Solanum lycopersicum
Solyc06g074240.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch06: 45899724-45900723 Solanum lycopersicum
Solyc06g074240.1 1.0kb downstream 1.0kb downstream 2497 true SL2.50ch06: 45897227-45899723 Solanum lycopersicum
Solyc06g074240.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch06: 45897227-45898226 Solanum lycopersicum
Solyc06g074240.1 2.0kb upstream 2.0kb upstream 3497 true SL2.50ch06: 45898227-45901723 Solanum lycopersicum
Solyc06g074240.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch06: 45899724-45901723 Solanum lycopersicum
Solyc06g074240.1 2.0kb downstream 2.0kb downstream 3497 true SL2.50ch06: 45896227-45899723 Solanum lycopersicum
Solyc06g074240.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch06: 45896227-45898226 Solanum lycopersicum
Solyc06g074240.1 5.0kb upstream 5.0kb upstream 6497 true SL2.50ch06: 45898227-45904723 Solanum lycopersicum
Solyc06g074240.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch06: 45899724-45904723 Solanum lycopersicum
Solyc06g074240.1 5.0kb downstream 5.0kb downstream 6497 true SL2.50ch06: 45893227-45899723 Solanum lycopersicum
Solyc06g074240.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch06: 45893227-45898226 Solanum lycopersicum
Solyc06g074240.1 10.0kb upstream 10.0kb upstream 11497 true SL2.50ch06: 45898227-45909723 Solanum lycopersicum
Solyc06g074240.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch06: 45899724-45909723 Solanum lycopersicum
Solyc06g074240.1 10.0kb downstream 10.0kb downstream 11497 true SL2.50ch06: 45888227-45899723 Solanum lycopersicum
Solyc06g074240.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch06: 45888227-45898226 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121470530 5263 Asterids View MSA
123749598 5271 Pentapetalae View MSA
122795342 5272 Eudicot View MSA
122048987 5273 Angiosperm View MSA
121311196 5274 Embryophyte View MSA
123348524 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain