Gene : Solyc06g084390.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR37236:SF1 - AUXIN-BINDING PROTEIN 1 Description:  ER auxin binding protein 1 (AHRD V1 **** Q9ZRX6_SOLLC); contains Interpro domain(s) IPR000886 Endoplasmic reticulum, targeting sequence
Genomic Order:  2789 Name:  ? Solyc06g084390.2
Secondary Identifier:  ? PAC:36128697
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc06g084390.2 0.5kb upstream 0.5kb upstream 3390 true SL2.50ch06: 49523049-49526438 Solanum lycopersicum
Solyc06g084390.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch06: 49525939-49526438 Solanum lycopersicum
Solyc06g084390.2 0.5kb downstream 0.5kb downstream 3390 true SL2.50ch06: 49522549-49525938 Solanum lycopersicum
Solyc06g084390.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch06: 49522549-49523048 Solanum lycopersicum
Solyc06g084390.2 1.0kb upstream 1.0kb upstream 3890 true SL2.50ch06: 49523049-49526938 Solanum lycopersicum
Solyc06g084390.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch06: 49525939-49526938 Solanum lycopersicum
Solyc06g084390.2 1.0kb downstream 1.0kb downstream 3890 true SL2.50ch06: 49522049-49525938 Solanum lycopersicum
Solyc06g084390.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch06: 49522049-49523048 Solanum lycopersicum
Solyc06g084390.2 2.0kb upstream 2.0kb upstream 4890 true SL2.50ch06: 49523049-49527938 Solanum lycopersicum
Solyc06g084390.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch06: 49525939-49527938 Solanum lycopersicum
Solyc06g084390.2 2.0kb downstream 2.0kb downstream 4890 true SL2.50ch06: 49521049-49525938 Solanum lycopersicum
Solyc06g084390.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch06: 49521049-49523048 Solanum lycopersicum
Solyc06g084390.2 5.0kb upstream 5.0kb upstream 7890 true SL2.50ch06: 49523049-49530938 Solanum lycopersicum
Solyc06g084390.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch06: 49525939-49530938 Solanum lycopersicum
Solyc06g084390.2 5.0kb downstream 5.0kb downstream 7890 true SL2.50ch06: 49518049-49525938 Solanum lycopersicum
Solyc06g084390.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch06: 49518049-49523048 Solanum lycopersicum
Solyc06g084390.2 10.0kb upstream 10.0kb upstream 12890 true SL2.50ch06: 49523049-49535938 Solanum lycopersicum
Solyc06g084390.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch06: 49525939-49535938 Solanum lycopersicum
Solyc06g084390.2 10.0kb downstream 10.0kb downstream 12890 true SL2.50ch06: 49513049-49525938 Solanum lycopersicum
Solyc06g084390.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch06: 49513049-49523048 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121470062 5263 Asterids View MSA
123737576 5271 Pentapetalae View MSA
122787976 5272 Eudicot View MSA
122049427 5273 Angiosperm View MSA
121346924 5274 Embryophyte View MSA
123426893 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain