Gene : Solyc06g084350.2 S. lycopersicum ITAG2.4
Defline:  (1 of 2) K12621 - U6 snRNA-associated Sm-like protein LSm2 (LSM2) Description:  U6 snRNA-associated Sm-like protein LSm2 (AHRD V1 **-- B9EPQ0_SALSA); contains Interpro domain(s) IPR016654 U6 snRNA-associated Sm-like protein LSm2
Genomic Order:  2785 Name:  ? Solyc06g084350.2
Secondary Identifier:  ? PAC:36130211
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc06g084350.2 0.5kb upstream 0.5kb upstream 4059 true SL2.50ch06: 49493626-49497684 Solanum lycopersicum
Solyc06g084350.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch06: 49497185-49497684 Solanum lycopersicum
Solyc06g084350.2 0.5kb downstream 0.5kb downstream 4059 true SL2.50ch06: 49493126-49497184 Solanum lycopersicum
Solyc06g084350.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch06: 49493126-49493625 Solanum lycopersicum
Solyc06g084350.2 1.0kb upstream 1.0kb upstream 4559 true SL2.50ch06: 49493626-49498184 Solanum lycopersicum
Solyc06g084350.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch06: 49497185-49498184 Solanum lycopersicum
Solyc06g084350.2 1.0kb downstream 1.0kb downstream 4559 true SL2.50ch06: 49492626-49497184 Solanum lycopersicum
Solyc06g084350.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch06: 49492626-49493625 Solanum lycopersicum
Solyc06g084350.2 2.0kb upstream 2.0kb upstream 5559 true SL2.50ch06: 49493626-49499184 Solanum lycopersicum
Solyc06g084350.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch06: 49497185-49499184 Solanum lycopersicum
Solyc06g084350.2 2.0kb downstream 2.0kb downstream 5559 true SL2.50ch06: 49491626-49497184 Solanum lycopersicum
Solyc06g084350.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch06: 49491626-49493625 Solanum lycopersicum
Solyc06g084350.2 5.0kb upstream 5.0kb upstream 8559 true SL2.50ch06: 49493626-49502184 Solanum lycopersicum
Solyc06g084350.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch06: 49497185-49502184 Solanum lycopersicum
Solyc06g084350.2 5.0kb downstream 5.0kb downstream 8559 true SL2.50ch06: 49488626-49497184 Solanum lycopersicum
Solyc06g084350.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch06: 49488626-49493625 Solanum lycopersicum
Solyc06g084350.2 10.0kb upstream 10.0kb upstream 13559 true SL2.50ch06: 49493626-49507184 Solanum lycopersicum
Solyc06g084350.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch06: 49497185-49507184 Solanum lycopersicum
Solyc06g084350.2 10.0kb downstream 10.0kb downstream 13559 true SL2.50ch06: 49483626-49497184 Solanum lycopersicum
Solyc06g084350.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch06: 49483626-49493625 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121390143 5263 Asterids View MSA
123743245 5271 Pentapetalae View MSA
122795918 5272 Eudicot View MSA
122043046 5273 Angiosperm View MSA
121347447 5274 Embryophyte View MSA
123425045 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain