Gene : Solyc06g084460.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR21089//PTHR21089:SF7 - SHIKIMATE DEHYDROGENASE // SUBFAMILY NOT NAMED Description:  Shikimate dehydrogenase (AHRD V1 ***- B6TSW1_MAIZE); contains Interpro domain(s) IPR011342 Quinate/shikimate 5-dehydrogenase
Genomic Order:  2796 Name:  ? Solyc06g084460.2
Secondary Identifier:  ? PAC:36131126
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum ARO-PWY Solanum lycopersicum pathologic  
Slycopersicum PWY-6163 Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc06g084460.2 0.5kb upstream 0.5kb upstream 4351 true SL2.50ch06: 49555253-49559603 Solanum lycopersicum
Solyc06g084460.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch06: 49559104-49559603 Solanum lycopersicum
Solyc06g084460.2 0.5kb downstream 0.5kb downstream 4351 true SL2.50ch06: 49554753-49559103 Solanum lycopersicum
Solyc06g084460.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch06: 49554753-49555252 Solanum lycopersicum
Solyc06g084460.2 1.0kb upstream 1.0kb upstream 4851 true SL2.50ch06: 49555253-49560103 Solanum lycopersicum
Solyc06g084460.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch06: 49559104-49560103 Solanum lycopersicum
Solyc06g084460.2 1.0kb downstream 1.0kb downstream 4851 true SL2.50ch06: 49554253-49559103 Solanum lycopersicum
Solyc06g084460.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch06: 49554253-49555252 Solanum lycopersicum
Solyc06g084460.2 2.0kb upstream 2.0kb upstream 5851 true SL2.50ch06: 49555253-49561103 Solanum lycopersicum
Solyc06g084460.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch06: 49559104-49561103 Solanum lycopersicum
Solyc06g084460.2 2.0kb downstream 2.0kb downstream 5851 true SL2.50ch06: 49553253-49559103 Solanum lycopersicum
Solyc06g084460.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch06: 49553253-49555252 Solanum lycopersicum
Solyc06g084460.2 5.0kb upstream 5.0kb upstream 8851 true SL2.50ch06: 49555253-49564103 Solanum lycopersicum
Solyc06g084460.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch06: 49559104-49564103 Solanum lycopersicum
Solyc06g084460.2 5.0kb downstream 5.0kb downstream 8851 true SL2.50ch06: 49550253-49559103 Solanum lycopersicum
Solyc06g084460.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch06: 49550253-49555252 Solanum lycopersicum
Solyc06g084460.2 10.0kb upstream 10.0kb upstream 13851 true SL2.50ch06: 49555253-49569103 Solanum lycopersicum
Solyc06g084460.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch06: 49559104-49569103 Solanum lycopersicum
Solyc06g084460.2 10.0kb downstream 10.0kb downstream 13851 true SL2.50ch06: 49545253-49559103 Solanum lycopersicum
Solyc06g084460.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch06: 49545253-49555252 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121791917 5273 Angiosperm View MSA
121478325 5263 Asterids View MSA
123749206 5271 Pentapetalae View MSA
122795293 5272 Eudicot View MSA
121063186 5274 Embryophyte View MSA
123102956 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain