Gene : Solyc06g083390.2 S. lycopersicum ITAG2.4
Defline:  (1 of 4) K13456 - RPM1-interacting protein 4 (RIN4) Description:  RPM1 interacting protein 4 transcript 2 (AHRD V1 ***- D2J0Y3_9ASTR); contains Interpro domain(s) IPR008700 Defence response, Rin4
Genomic Order:  2689 Name:  ? Solyc06g083390.2
Secondary Identifier:  ? PAC:36128731
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc06g083390.2 0.5kb upstream 0.5kb upstream 2872 true SL2.50ch06: 48801916-48804787 Solanum lycopersicum
Solyc06g083390.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch06: 48804288-48804787 Solanum lycopersicum
Solyc06g083390.2 0.5kb downstream 0.5kb downstream 2872 true SL2.50ch06: 48801416-48804287 Solanum lycopersicum
Solyc06g083390.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch06: 48801416-48801915 Solanum lycopersicum
Solyc06g083390.2 1.0kb upstream 1.0kb upstream 3372 true SL2.50ch06: 48801916-48805287 Solanum lycopersicum
Solyc06g083390.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch06: 48804288-48805287 Solanum lycopersicum
Solyc06g083390.2 1.0kb downstream 1.0kb downstream 3372 true SL2.50ch06: 48800916-48804287 Solanum lycopersicum
Solyc06g083390.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch06: 48800916-48801915 Solanum lycopersicum
Solyc06g083390.2 2.0kb upstream 2.0kb upstream 4372 true SL2.50ch06: 48801916-48806287 Solanum lycopersicum
Solyc06g083390.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch06: 48804288-48806287 Solanum lycopersicum
Solyc06g083390.2 2.0kb downstream 2.0kb downstream 4372 true SL2.50ch06: 48799916-48804287 Solanum lycopersicum
Solyc06g083390.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch06: 48799916-48801915 Solanum lycopersicum
Solyc06g083390.2 5.0kb upstream 5.0kb upstream 7372 true SL2.50ch06: 48801916-48809287 Solanum lycopersicum
Solyc06g083390.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch06: 48804288-48809287 Solanum lycopersicum
Solyc06g083390.2 5.0kb downstream 5.0kb downstream 7372 true SL2.50ch06: 48796916-48804287 Solanum lycopersicum
Solyc06g083390.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch06: 48796916-48801915 Solanum lycopersicum
Solyc06g083390.2 10.0kb upstream 10.0kb upstream 12372 true SL2.50ch06: 48801916-48814287 Solanum lycopersicum
Solyc06g083390.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch06: 48804288-48814287 Solanum lycopersicum
Solyc06g083390.2 10.0kb downstream 10.0kb downstream 12372 true SL2.50ch06: 48791916-48804287 Solanum lycopersicum
Solyc06g083390.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch06: 48791916-48801915 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121386490 5263 Asterids View MSA
123749229 5271 Pentapetalae View MSA
122795391 5272 Eudicot View MSA
122048165 5273 Angiosperm View MSA
121344169 5274 Embryophyte View MSA
123379991 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain