Gene : Solyc06g083460.2 S. lycopersicum ITAG2.4
Defline:  (1 of 2) PTHR22847//PTHR22847:SF473 - WD40 REPEAT PROTEIN // SUBFAMILY NOT NAMED Description:  WD-40 repeat family protein (AHRD V1 **-- D7LF16_ARALY); contains Interpro domain(s) IPR020472 G-protein beta WD-40 repeat, region
Genomic Order:  2696 Name:  ? Solyc06g083460.2
Secondary Identifier:  ? PAC:36130946
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc06g083460.2 0.5kb upstream 0.5kb upstream 8104 true SL2.50ch06: 48855760-48863863 Solanum lycopersicum
Solyc06g083460.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch06: 48863364-48863863 Solanum lycopersicum
Solyc06g083460.2 0.5kb downstream 0.5kb downstream 8104 true SL2.50ch06: 48855260-48863363 Solanum lycopersicum
Solyc06g083460.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch06: 48855260-48855759 Solanum lycopersicum
Solyc06g083460.2 1.0kb upstream 1.0kb upstream 8604 true SL2.50ch06: 48855760-48864363 Solanum lycopersicum
Solyc06g083460.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch06: 48863364-48864363 Solanum lycopersicum
Solyc06g083460.2 1.0kb downstream 1.0kb downstream 8604 true SL2.50ch06: 48854760-48863363 Solanum lycopersicum
Solyc06g083460.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch06: 48854760-48855759 Solanum lycopersicum
Solyc06g083460.2 2.0kb upstream 2.0kb upstream 9604 true SL2.50ch06: 48855760-48865363 Solanum lycopersicum
Solyc06g083460.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch06: 48863364-48865363 Solanum lycopersicum
Solyc06g083460.2 2.0kb downstream 2.0kb downstream 9604 true SL2.50ch06: 48853760-48863363 Solanum lycopersicum
Solyc06g083460.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch06: 48853760-48855759 Solanum lycopersicum
Solyc06g083460.2 5.0kb upstream 5.0kb upstream 12604 true SL2.50ch06: 48855760-48868363 Solanum lycopersicum
Solyc06g083460.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch06: 48863364-48868363 Solanum lycopersicum
Solyc06g083460.2 5.0kb downstream 5.0kb downstream 12604 true SL2.50ch06: 48850760-48863363 Solanum lycopersicum
Solyc06g083460.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch06: 48850760-48855759 Solanum lycopersicum
Solyc06g083460.2 10.0kb upstream 10.0kb upstream 17604 true SL2.50ch06: 48855760-48873363 Solanum lycopersicum
Solyc06g083460.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch06: 48863364-48873363 Solanum lycopersicum
Solyc06g083460.2 10.0kb downstream 10.0kb downstream 17604 true SL2.50ch06: 48845760-48863363 Solanum lycopersicum
Solyc06g083460.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch06: 48845760-48855759 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121469689 5263 Asterids View MSA
123751820 5271 Pentapetalae View MSA
122789823 5272 Eudicot View MSA
122046787 5273 Angiosperm View MSA
123429146 5275 Viridiplantae View MSA
121350041 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain