Gene : Solyc06g083430.1 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR31307:SF17 - GENOMIC DNA, CHROMOSOME 3, TAC CLONE:K7P8 Description:  Transcription factor (AHRD V1 *--* D7LLP9_ARALY); contains Interpro domain(s) IPR006578 MADF domain
Genomic Order:  2693 Name:  ? Solyc06g083430.1
Secondary Identifier:  ? PAC:36128920
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc06g083430.1 0.5kb upstream 0.5kb upstream 1478 true SL2.50ch06: 48842414-48843891 Solanum lycopersicum
Solyc06g083430.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch06: 48843392-48843891 Solanum lycopersicum
Solyc06g083430.1 0.5kb downstream 0.5kb downstream 1478 true SL2.50ch06: 48841914-48843391 Solanum lycopersicum
Solyc06g083430.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch06: 48841914-48842413 Solanum lycopersicum
Solyc06g083430.1 1.0kb upstream 1.0kb upstream 1978 true SL2.50ch06: 48842414-48844391 Solanum lycopersicum
Solyc06g083430.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch06: 48843392-48844391 Solanum lycopersicum
Solyc06g083430.1 1.0kb downstream 1.0kb downstream 1978 true SL2.50ch06: 48841414-48843391 Solanum lycopersicum
Solyc06g083430.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch06: 48841414-48842413 Solanum lycopersicum
Solyc06g083430.1 2.0kb upstream 2.0kb upstream 2978 true SL2.50ch06: 48842414-48845391 Solanum lycopersicum
Solyc06g083430.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch06: 48843392-48845391 Solanum lycopersicum
Solyc06g083430.1 2.0kb downstream 2.0kb downstream 2978 true SL2.50ch06: 48840414-48843391 Solanum lycopersicum
Solyc06g083430.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch06: 48840414-48842413 Solanum lycopersicum
Solyc06g083430.1 5.0kb upstream 5.0kb upstream 5978 true SL2.50ch06: 48842414-48848391 Solanum lycopersicum
Solyc06g083430.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch06: 48843392-48848391 Solanum lycopersicum
Solyc06g083430.1 5.0kb downstream 5.0kb downstream 5978 true SL2.50ch06: 48837414-48843391 Solanum lycopersicum
Solyc06g083430.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch06: 48837414-48842413 Solanum lycopersicum
Solyc06g083430.1 10.0kb upstream 10.0kb upstream 10978 true SL2.50ch06: 48842414-48853391 Solanum lycopersicum
Solyc06g083430.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch06: 48843392-48853391 Solanum lycopersicum
Solyc06g083430.1 10.0kb downstream 10.0kb downstream 10978 true SL2.50ch06: 48832414-48843391 Solanum lycopersicum
Solyc06g083430.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch06: 48832414-48842413 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121414073 5263 Asterids View MSA
123747324 5271 Pentapetalae View MSA
122790376 5272 Eudicot View MSA
122048588 5273 Angiosperm View MSA
121351505 5274 Embryophyte View MSA
123382195 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain