Gene : Solyc06g082210.1 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR31165:SF6 - PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 6 Description:  Light-dependent short hypocotyls 1 (AHRD V1 ***- D7M6V0_ARALY); contains Interpro domain(s) IPR006936 Protein of unknown function DUF640
Genomic Order:  2573 Name:  ? Solyc06g082210.1
Secondary Identifier:  ? PAC:36129729
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc06g082210.1 0.5kb upstream 0.5kb upstream 1169 true SL2.50ch06: 48127375-48128543 Solanum lycopersicum
Solyc06g082210.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch06: 48127375-48127874 Solanum lycopersicum
Solyc06g082210.1 0.5kb downstream 0.5kb downstream 1169 true SL2.50ch06: 48127875-48129043 Solanum lycopersicum
Solyc06g082210.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch06: 48128544-48129043 Solanum lycopersicum
Solyc06g082210.1 1.0kb upstream 1.0kb upstream 1669 true SL2.50ch06: 48126875-48128543 Solanum lycopersicum
Solyc06g082210.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch06: 48126875-48127874 Solanum lycopersicum
Solyc06g082210.1 1.0kb downstream 1.0kb downstream 1669 true SL2.50ch06: 48127875-48129543 Solanum lycopersicum
Solyc06g082210.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch06: 48128544-48129543 Solanum lycopersicum
Solyc06g082210.1 2.0kb upstream 2.0kb upstream 2669 true SL2.50ch06: 48125875-48128543 Solanum lycopersicum
Solyc06g082210.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch06: 48125875-48127874 Solanum lycopersicum
Solyc06g082210.1 2.0kb downstream 2.0kb downstream 2669 true SL2.50ch06: 48127875-48130543 Solanum lycopersicum
Solyc06g082210.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch06: 48128544-48130543 Solanum lycopersicum
Solyc06g082210.1 5.0kb upstream 5.0kb upstream 5669 true SL2.50ch06: 48122875-48128543 Solanum lycopersicum
Solyc06g082210.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch06: 48122875-48127874 Solanum lycopersicum
Solyc06g082210.1 5.0kb downstream 5.0kb downstream 5669 true SL2.50ch06: 48127875-48133543 Solanum lycopersicum
Solyc06g082210.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch06: 48128544-48133543 Solanum lycopersicum
Solyc06g082210.1 10.0kb upstream 10.0kb upstream 10669 true SL2.50ch06: 48117875-48128543 Solanum lycopersicum
Solyc06g082210.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch06: 48117875-48127874 Solanum lycopersicum
Solyc06g082210.1 10.0kb downstream 10.0kb downstream 10669 true SL2.50ch06: 48127875-48138543 Solanum lycopersicum
Solyc06g082210.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch06: 48128544-48138543 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121473663 5263 Asterids View MSA
123741885 5271 Pentapetalae View MSA
122789357 5272 Eudicot View MSA
122049887 5273 Angiosperm View MSA
121351474 5274 Embryophyte View MSA
123382179 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain