Gene : Solyc11g006350.1 S. lycopersicum ITAG2.4
Defline:  (1 of 1) 2.1.3.2 - Aspartate carbamoyltransferase / Carbamylaspartotranskinase Description:  Aspartate carbamoyltransferase (AHRD V1 ***- Q8L6B8_SOLTU); contains Interpro domain(s) IPR002082 Aspartate carbamoyltransferase, eukaryotic
Genomic Order:  136 Name:  ? Solyc11g006350.1
Secondary Identifier:  ? PAC:36152506
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum PWY0-162 Solanum lycopersicum pathologic  
Slycopersicum PWY-5686 Solanum lycopersicum pathologic  
Slycopersicum PWY-7211 Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc11g006350.1 0.5kb upstream 0.5kb upstream 1634 true SL2.50ch11: 1068921-1070554 Solanum lycopersicum
Solyc11g006350.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch11: 1070055-1070554 Solanum lycopersicum
Solyc11g006350.1 0.5kb downstream 0.5kb downstream 1634 true SL2.50ch11: 1068421-1070054 Solanum lycopersicum
Solyc11g006350.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch11: 1068421-1068920 Solanum lycopersicum
Solyc11g006350.1 1.0kb upstream 1.0kb upstream 2134 true SL2.50ch11: 1068921-1071054 Solanum lycopersicum
Solyc11g006350.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch11: 1070055-1071054 Solanum lycopersicum
Solyc11g006350.1 1.0kb downstream 1.0kb downstream 2134 true SL2.50ch11: 1067921-1070054 Solanum lycopersicum
Solyc11g006350.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch11: 1067921-1068920 Solanum lycopersicum
Solyc11g006350.1 2.0kb upstream 2.0kb upstream 3134 true SL2.50ch11: 1068921-1072054 Solanum lycopersicum
Solyc11g006350.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch11: 1070055-1072054 Solanum lycopersicum
Solyc11g006350.1 2.0kb downstream 2.0kb downstream 3134 true SL2.50ch11: 1066921-1070054 Solanum lycopersicum
Solyc11g006350.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch11: 1066921-1068920 Solanum lycopersicum
Solyc11g006350.1 5.0kb upstream 5.0kb upstream 6134 true SL2.50ch11: 1068921-1075054 Solanum lycopersicum
Solyc11g006350.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch11: 1070055-1075054 Solanum lycopersicum
Solyc11g006350.1 5.0kb downstream 5.0kb downstream 6134 true SL2.50ch11: 1063921-1070054 Solanum lycopersicum
Solyc11g006350.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch11: 1063921-1068920 Solanum lycopersicum
Solyc11g006350.1 10.0kb upstream 10.0kb upstream 11134 true SL2.50ch11: 1068921-1080054 Solanum lycopersicum
Solyc11g006350.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch11: 1070055-1080054 Solanum lycopersicum
Solyc11g006350.1 10.0kb downstream 10.0kb downstream 11134 true SL2.50ch11: 1058921-1070054 Solanum lycopersicum
Solyc11g006350.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch11: 1058921-1068920 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121479535 5263 Asterids View MSA
123737455 5271 Pentapetalae View MSA
122791226 5272 Eudicot View MSA
122047002 5273 Angiosperm View MSA
121345349 5274 Embryophyte View MSA
123427161 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain