Gene : Solyc11g006340.1 S. lycopersicum ITAG2.4
Defline:  (1 of 2) K11808 - phosphoribosylaminoimidazole carboxylase (ADE2) Description:  Phosphoribosylaminoimidazole carboxylase ATPase subunit (AHRD V1 *-** B9LJ70_CHLSY); contains Interpro domain(s) IPR016301 Phosphoribosylaminoimidazole carboxylase
Genomic Order:  135 Name:  ? Solyc11g006340.1
Secondary Identifier:  ? PAC:36153026
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum PWY-6124 Solanum lycopersicum pathologic  
Slycopersicum PWY-841 Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc11g006340.1 0.5kb upstream 0.5kb upstream 5930 true SL2.50ch11: 1061260-1067189 Solanum lycopersicum
Solyc11g006340.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch11: 1061260-1061759 Solanum lycopersicum
Solyc11g006340.1 0.5kb downstream 0.5kb downstream 5930 true SL2.50ch11: 1061760-1067689 Solanum lycopersicum
Solyc11g006340.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch11: 1067190-1067689 Solanum lycopersicum
Solyc11g006340.1 1.0kb upstream 1.0kb upstream 6430 true SL2.50ch11: 1060760-1067189 Solanum lycopersicum
Solyc11g006340.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch11: 1060760-1061759 Solanum lycopersicum
Solyc11g006340.1 1.0kb downstream 1.0kb downstream 6430 true SL2.50ch11: 1061760-1068189 Solanum lycopersicum
Solyc11g006340.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch11: 1067190-1068189 Solanum lycopersicum
Solyc11g006340.1 2.0kb upstream 2.0kb upstream 7430 true SL2.50ch11: 1059760-1067189 Solanum lycopersicum
Solyc11g006340.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch11: 1059760-1061759 Solanum lycopersicum
Solyc11g006340.1 2.0kb downstream 2.0kb downstream 7430 true SL2.50ch11: 1061760-1069189 Solanum lycopersicum
Solyc11g006340.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch11: 1067190-1069189 Solanum lycopersicum
Solyc11g006340.1 5.0kb upstream 5.0kb upstream 10430 true SL2.50ch11: 1056760-1067189 Solanum lycopersicum
Solyc11g006340.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch11: 1056760-1061759 Solanum lycopersicum
Solyc11g006340.1 5.0kb downstream 5.0kb downstream 10430 true SL2.50ch11: 1061760-1072189 Solanum lycopersicum
Solyc11g006340.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch11: 1067190-1072189 Solanum lycopersicum
Solyc11g006340.1 10.0kb upstream 10.0kb upstream 15430 true SL2.50ch11: 1051760-1067189 Solanum lycopersicum
Solyc11g006340.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch11: 1051760-1061759 Solanum lycopersicum
Solyc11g006340.1 10.0kb downstream 10.0kb downstream 15430 true SL2.50ch11: 1061760-1077189 Solanum lycopersicum
Solyc11g006340.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch11: 1067190-1077189 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121468469 5263 Asterids View MSA
123748384 5271 Pentapetalae View MSA
122790389 5272 Eudicot View MSA
122043847 5273 Angiosperm View MSA
121345366 5274 Embryophyte View MSA
123425127 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain