Gene : Solyc11g006880.1 S. lycopersicum ITAG2.4
Defline:  (1 of 1) KOG4054 - Uncharacterized conserved protein Description:  Genomic DNA chromosome 5 TAC clone K17N15 (AHRD V1 **-- Q9FHN3_ARATH); contains Interpro domain(s) IPR009787 Protein of unknown function DUF1352
Genomic Order:  187 Name:  ? Solyc11g006880.1
Secondary Identifier:  ? PAC:36152598
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc11g006880.1 0.5kb upstream 0.5kb upstream 3336 true SL2.50ch11: 1417654-1420989 Solanum lycopersicum
Solyc11g006880.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch11: 1420490-1420989 Solanum lycopersicum
Solyc11g006880.1 0.5kb downstream 0.5kb downstream 3336 true SL2.50ch11: 1417154-1420489 Solanum lycopersicum
Solyc11g006880.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch11: 1417154-1417653 Solanum lycopersicum
Solyc11g006880.1 1.0kb upstream 1.0kb upstream 3836 true SL2.50ch11: 1417654-1421489 Solanum lycopersicum
Solyc11g006880.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch11: 1420490-1421489 Solanum lycopersicum
Solyc11g006880.1 1.0kb downstream 1.0kb downstream 3836 true SL2.50ch11: 1416654-1420489 Solanum lycopersicum
Solyc11g006880.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch11: 1416654-1417653 Solanum lycopersicum
Solyc11g006880.1 2.0kb upstream 2.0kb upstream 4836 true SL2.50ch11: 1417654-1422489 Solanum lycopersicum
Solyc11g006880.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch11: 1420490-1422489 Solanum lycopersicum
Solyc11g006880.1 2.0kb downstream 2.0kb downstream 4836 true SL2.50ch11: 1415654-1420489 Solanum lycopersicum
Solyc11g006880.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch11: 1415654-1417653 Solanum lycopersicum
Solyc11g006880.1 5.0kb upstream 5.0kb upstream 7836 true SL2.50ch11: 1417654-1425489 Solanum lycopersicum
Solyc11g006880.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch11: 1420490-1425489 Solanum lycopersicum
Solyc11g006880.1 5.0kb downstream 5.0kb downstream 7836 true SL2.50ch11: 1412654-1420489 Solanum lycopersicum
Solyc11g006880.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch11: 1412654-1417653 Solanum lycopersicum
Solyc11g006880.1 10.0kb upstream 10.0kb upstream 12836 true SL2.50ch11: 1417654-1430489 Solanum lycopersicum
Solyc11g006880.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch11: 1420490-1430489 Solanum lycopersicum
Solyc11g006880.1 10.0kb downstream 10.0kb downstream 12836 true SL2.50ch11: 1407654-1420489 Solanum lycopersicum
Solyc11g006880.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch11: 1407654-1417653 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121476497 5263 Asterids View MSA
123743270 5271 Pentapetalae View MSA
122789019 5272 Eudicot View MSA
122045382 5273 Angiosperm View MSA
121344737 5274 Embryophyte View MSA
123427393 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain