Gene : Solyc11g005670.1 S. lycopersicum ITAG2.4
Defline:  (1 of 3) PTHR10666:SF150 - POLYUBIQUITIN 3 Description:  Ubiquitin (AHRD V1 ***- Q2UZT4_MUSAC); contains Interpro domain(s) IPR019956 Ubiquitin subgroup
Genomic Order:  68 Name:  ? Solyc11g005670.1
Secondary Identifier:  ? PAC:36153792
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

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Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc11g005670.1 0.5kb upstream 0.5kb upstream 2105 true SL2.50ch11: 495833-497937 Solanum lycopersicum
Solyc11g005670.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch11: 495833-496332 Solanum lycopersicum
Solyc11g005670.1 0.5kb downstream 0.5kb downstream 2105 true SL2.50ch11: 496333-498437 Solanum lycopersicum
Solyc11g005670.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch11: 497938-498437 Solanum lycopersicum
Solyc11g005670.1 1.0kb upstream 1.0kb upstream 2605 true SL2.50ch11: 495333-497937 Solanum lycopersicum
Solyc11g005670.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch11: 495333-496332 Solanum lycopersicum
Solyc11g005670.1 1.0kb downstream 1.0kb downstream 2605 true SL2.50ch11: 496333-498937 Solanum lycopersicum
Solyc11g005670.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch11: 497938-498937 Solanum lycopersicum
Solyc11g005670.1 2.0kb upstream 2.0kb upstream 3605 true SL2.50ch11: 494333-497937 Solanum lycopersicum
Solyc11g005670.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch11: 494333-496332 Solanum lycopersicum
Solyc11g005670.1 2.0kb downstream 2.0kb downstream 3605 true SL2.50ch11: 496333-499937 Solanum lycopersicum
Solyc11g005670.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch11: 497938-499937 Solanum lycopersicum
Solyc11g005670.1 5.0kb upstream 5.0kb upstream 6605 true SL2.50ch11: 491333-497937 Solanum lycopersicum
Solyc11g005670.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch11: 491333-496332 Solanum lycopersicum
Solyc11g005670.1 5.0kb downstream 5.0kb downstream 6605 true SL2.50ch11: 496333-502937 Solanum lycopersicum
Solyc11g005670.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch11: 497938-502937 Solanum lycopersicum
Solyc11g005670.1 10.0kb upstream 10.0kb upstream 11605 true SL2.50ch11: 486333-497937 Solanum lycopersicum
Solyc11g005670.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch11: 486333-496332 Solanum lycopersicum
Solyc11g005670.1 10.0kb downstream 10.0kb downstream 11605 true SL2.50ch11: 496333-507937 Solanum lycopersicum
Solyc11g005670.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch11: 497938-507937 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029747 5273 Angiosperm View MSA
121480608 5263 Asterids View MSA
123752540 5271 Pentapetalae View MSA
122796500 5272 Eudicot View MSA
121351277 5274 Embryophyte View MSA
123428084 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain