Gene : Solyc11g005620.1 S. lycopersicum ITAG2.4
Defline:  (1 of 1) 2.7.2.8 - Acetylglutamate kinase Description:  Acetylglutamate kinase-like protein (AHRD V1 ***- Q949B4_ORYSA); contains Interpro domain(s) IPR011148 N-acetylglutamate kinase
Genomic Order:  63 Name:  ? Solyc11g005620.1
Secondary Identifier:  ? PAC:36152828
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum ARGSYNBSUB-PWY Solanum lycopersicum pathologic  
Slycopersicum ARGSYN-PWY Solanum lycopersicum pathologic  
Slycopersicum GLUTORN-PWY Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc11g005620.1 0.5kb upstream 0.5kb upstream 1544 true SL2.50ch11: 479707-481250 Solanum lycopersicum
Solyc11g005620.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch11: 479707-480206 Solanum lycopersicum
Solyc11g005620.1 0.5kb downstream 0.5kb downstream 1544 true SL2.50ch11: 480207-481750 Solanum lycopersicum
Solyc11g005620.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch11: 481251-481750 Solanum lycopersicum
Solyc11g005620.1 1.0kb upstream 1.0kb upstream 2044 true SL2.50ch11: 479207-481250 Solanum lycopersicum
Solyc11g005620.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch11: 479207-480206 Solanum lycopersicum
Solyc11g005620.1 1.0kb downstream 1.0kb downstream 2044 true SL2.50ch11: 480207-482250 Solanum lycopersicum
Solyc11g005620.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch11: 481251-482250 Solanum lycopersicum
Solyc11g005620.1 2.0kb upstream 2.0kb upstream 3044 true SL2.50ch11: 478207-481250 Solanum lycopersicum
Solyc11g005620.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch11: 478207-480206 Solanum lycopersicum
Solyc11g005620.1 2.0kb downstream 2.0kb downstream 3044 true SL2.50ch11: 480207-483250 Solanum lycopersicum
Solyc11g005620.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch11: 481251-483250 Solanum lycopersicum
Solyc11g005620.1 5.0kb upstream 5.0kb upstream 6044 true SL2.50ch11: 475207-481250 Solanum lycopersicum
Solyc11g005620.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch11: 475207-480206 Solanum lycopersicum
Solyc11g005620.1 5.0kb downstream 5.0kb downstream 6044 true SL2.50ch11: 480207-486250 Solanum lycopersicum
Solyc11g005620.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch11: 481251-486250 Solanum lycopersicum
Solyc11g005620.1 10.0kb upstream 10.0kb upstream 11044 true SL2.50ch11: 470207-481250 Solanum lycopersicum
Solyc11g005620.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch11: 470207-480206 Solanum lycopersicum
Solyc11g005620.1 10.0kb downstream 10.0kb downstream 11044 true SL2.50ch11: 480207-491250 Solanum lycopersicum
Solyc11g005620.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch11: 481251-491250 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121473097 5263 Asterids View MSA
123739875 5271 Pentapetalae View MSA
122792416 5272 Eudicot View MSA
122045485 5273 Angiosperm View MSA
121347525 5274 Embryophyte View MSA
123424020 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain