Gene : Solyc11g005010.1 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR22957:SF26 - PROTEIN TBC-3, ISOFORM B Description:  TBC1 domain family member 13 (AHRD V1 *--- TBC13_MOUSE); contains Interpro domain(s) IPR000195 RabGAP/TBC
Genomic Order:  2 Name:  ? Solyc11g005010.1
Secondary Identifier:  ? PAC:36152584
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc11g005010.1 0.5kb upstream 0.5kb upstream 10930 true SL2.50ch11: 15822-26751 Solanum lycopersicum
Solyc11g005010.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch11: 26252-26751 Solanum lycopersicum
Solyc11g005010.1 0.5kb downstream 0.5kb downstream 10930 true SL2.50ch11: 15322-26251 Solanum lycopersicum
Solyc11g005010.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch11: 15322-15821 Solanum lycopersicum
Solyc11g005010.1 1.0kb upstream 1.0kb upstream 11430 true SL2.50ch11: 15822-27251 Solanum lycopersicum
Solyc11g005010.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch11: 26252-27251 Solanum lycopersicum
Solyc11g005010.1 1.0kb downstream 1.0kb downstream 11430 true SL2.50ch11: 14822-26251 Solanum lycopersicum
Solyc11g005010.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch11: 14822-15821 Solanum lycopersicum
Solyc11g005010.1 2.0kb upstream 2.0kb upstream 12430 true SL2.50ch11: 15822-28251 Solanum lycopersicum
Solyc11g005010.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch11: 26252-28251 Solanum lycopersicum
Solyc11g005010.1 2.0kb downstream 2.0kb downstream 12430 true SL2.50ch11: 13822-26251 Solanum lycopersicum
Solyc11g005010.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch11: 13822-15821 Solanum lycopersicum
Solyc11g005010.1 5.0kb upstream 5.0kb upstream 15430 true SL2.50ch11: 15822-31251 Solanum lycopersicum
Solyc11g005010.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch11: 26252-31251 Solanum lycopersicum
Solyc11g005010.1 5.0kb downstream 5.0kb downstream 15430 true SL2.50ch11: 10822-26251 Solanum lycopersicum
Solyc11g005010.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch11: 10822-15821 Solanum lycopersicum
Solyc11g005010.1 10.0kb upstream 10.0kb upstream 20430 true SL2.50ch11: 15822-36251 Solanum lycopersicum
Solyc11g005010.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch11: 26252-36251 Solanum lycopersicum
Solyc11g005010.1 10.0kb downstream 10.0kb downstream 20430 true SL2.50ch11: 5822-26251 Solanum lycopersicum
Solyc11g005010.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch11: 5822-15821 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121470581 5263 Asterids View MSA
123749842 5271 Pentapetalae View MSA
122786792 5272 Eudicot View MSA
122047637 5273 Angiosperm View MSA
121347047 5274 Embryophyte View MSA
123426413 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain